RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CEP126Q9P2H0 1117 aa25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 OGDHLQ9ULD0 1010 aa25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 BTDP43251 543 aa25.21■■□□□ 1.63
PDLIM1-202ENST00000477757 COL2A1P02458 1487 aaPredicted RBP25.21■■□□□ 1.63
PDLIM1-202ENST00000477757 LAMA2P24043 3122 aaKnown RBP25.2■■□□□ 1.63
PDLIM1-202ENST00000477757 MROH7-TTC4A0A0A0MT08 1334 aa25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 PFASO15067 1338 aa25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 PABPC4Q13310 644 aaKnown RBP eCLIP25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 RASGRF1Q13972 1273 aa25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 MAP3K21Q5TCX8 1036 aa25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 TRIB2Q92519 343 aa25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 TBC1D2Q9BYX2 928 aa25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 ATAD5Q96QE3 1844 aa25.2■■□□□ 1.62
PDLIM1-202ENST00000477757 NPM3O75607 178 aaKnown RBP25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 SPP2Q13103 211 aa25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 CCDC102BQ68D86 513 aa25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 ZNF280CQ8ND82 737 aa25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 UBE2OQ9C0C9 1292 aaKnown RBP25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 OSBPL5Q9H0X9 879 aaPredicted RBP25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 ASCC2Q9H1I8 757 aaPredicted RBP25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 MORF4L1Q9UBU8 362 aa25.19■■□□□ 1.62
PDLIM1-202ENST00000477757 FAM196BA6NMK8 535 aa25.18■■□□□ 1.62
PDLIM1-202ENST00000477757 HMGCS2P54868 508 aa25.18■■□□□ 1.62
PDLIM1-202ENST00000477757 RHBDL3P58872 404 aa25.18■■□□□ 1.62
PDLIM1-202ENST00000477757 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.18■■□□□ 1.62
PDLIM1-202ENST00000477757 ADORA1P30542 326 aa25.17■■□□□ 1.62
PDLIM1-202ENST00000477757 ABCF2Q9UG63 623 aa25.17■■□□□ 1.62
PDLIM1-202ENST00000477757 PRKAR2AP13861 404 aaKnown RBP25.16■■□□□ 1.62
PDLIM1-202ENST00000477757 IL15P40933 162 aaPredicted RBP25.16■■□□□ 1.62
PDLIM1-202ENST00000477757 SPTY2D1Q68D10 685 aaPredicted RBP25.16■■□□□ 1.62
PDLIM1-202ENST00000477757 ZNF521Q96K83 1311 aa25.15■■□□□ 1.62
PDLIM1-202ENST00000477757 GPR75-ASB3A0A0A6YYF3 556 aa25.15■■□□□ 1.62
PDLIM1-202ENST00000477757 COL6A1P12109 1028 aa25.15■■□□□ 1.62
PDLIM1-202ENST00000477757 SH3D19Q5HYK7 790 aa25.15■■□□□ 1.62
PDLIM1-202ENST00000477757 COL25A1Q9BXS0 654 aaPredicted RBP25.15■■□□□ 1.62
PDLIM1-202ENST00000477757 XRCC5P13010 732 aaKnown RBP25.14■■□□□ 1.62
PDLIM1-202ENST00000477757 SOCS4Q8WXH5 440 aa25.14■■□□□ 1.62
PDLIM1-202ENST00000477757 SSH1Q8WYL5 1049 aa25.14■■□□□ 1.62
PDLIM1-202ENST00000477757 CAP2P40123 477 aa25.13■■□□□ 1.61
PDLIM1-202ENST00000477757 MECOMQ03112 1051 aa25.13■■□□□ 1.61
PDLIM1-202ENST00000477757 ZNF384Q8TF68 577 aa25.13■■□□□ 1.61
PDLIM1-202ENST00000477757 DNAH12Q6ZR08 3092 aa25.12■■□□□ 1.61
PDLIM1-202ENST00000477757 USP17L5A8MUK1 530 aa25.12■■□□□ 1.61
PDLIM1-202ENST00000477757 MAP4K4O95819 1239 aaPredicted RBP25.12■■□□□ 1.61
PDLIM1-202ENST00000477757 UBTFL1P0CB47 393 aaPredicted RBP25.12■■□□□ 1.61
PDLIM1-202ENST00000477757 CYP2B6P20813 491 aa25.12■■□□□ 1.61
PDLIM1-202ENST00000477757 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDLIM1-202ENST00000477757 IRX3P78415 501 aaPredicted RBP25.11■■□□□ 1.61
PDLIM1-202ENST00000477757 RRP1BQ14684 758 aaKnown RBP25.11■■□□□ 1.61
PDLIM1-202ENST00000477757 TRMT44Q8IYL2 757 aaKnown RBP25.11■■□□□ 1.61
PDLIM1-202ENST00000477757 NUDT12Q9BQG2 462 aa25.11■■□□□ 1.61
PDLIM1-202ENST00000477757 AS3MTQ9HBK9 375 aa25.11■■□□□ 1.61
PDLIM1-202ENST00000477757 PA2G4Q9UQ80 394 aaKnown RBP25.11■■□□□ 1.61
PDLIM1-202ENST00000477757 VCANP13611 3396 aa25.11■■□□□ 1.61
PDLIM1-202ENST00000477757 FAM109BQ6ICB4 259 aaPredicted RBP25.1■■□□□ 1.61
PDLIM1-202ENST00000477757 ERICH6Q7L0X2 663 aa25.1■■□□□ 1.61
PDLIM1-202ENST00000477757 COPRSQ9NQ92 184 aa25.1■■□□□ 1.61
PDLIM1-202ENST00000477757 MAST2Q6P0Q8 1798 aa25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 ZKSCAN1P17029 563 aaPredicted RBP25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 MTMR2Q13614 643 aa25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 LRRC26Q2I0M4 334 aa25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 WDR18Q9BV38 432 aa25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 TXNRD2Q9NNW7 524 aa25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 HERC5Q9UII4 1024 aaKnown RBP25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 SIPA1L1O43166 1804 aa25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 EYSQ5T1H1 3165 aa25.09■■□□□ 1.61
PDLIM1-202ENST00000477757 HOXA7P31268 230 aaPredicted RBP25.08■■□□□ 1.61
PDLIM1-202ENST00000477757 CACNB2Q08289 660 aaPredicted RBP25.08■■□□□ 1.61
PDLIM1-202ENST00000477757 GPRC5AQ8NFJ5 357 aa25.08■■□□□ 1.61
PDLIM1-202ENST00000477757 GUCD1Q96NT3 240 aa25.08■■□□□ 1.61
PDLIM1-202ENST00000477757 POTEB2H3BUK9 544 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 MAPK4P31152 587 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 BACE1P56817 501 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 TIMM10P62072 90 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 HERVK_113P62684 666 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 GSTO1P78417 241 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 MDM2Q00987 491 aaPredicted RBP25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 PDE3AQ14432 1141 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 MVPQ14764 893 aaKnown RBP25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 LHX8Q68G74 356 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 USP6NLQ92738 828 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 FRMPD3Q5JV73 1810 aa25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 SPTBN5Q9NRC6 3674 aaKnown RBP25.07■■□□□ 1.6
PDLIM1-202ENST00000477757 A0A1B0GUL7 405 aa25.06■■□□□ 1.6
PDLIM1-202ENST00000477757 PEX10O60683 326 aa25.06■■□□□ 1.6
PDLIM1-202ENST00000477757 NSUN4Q96CB9 384 aaKnown RBP25.06■■□□□ 1.6
PDLIM1-202ENST00000477757 XAGE2Q96GT9 111 aa25.06■■□□□ 1.6
PDLIM1-202ENST00000477757 P2RX7Q99572 595 aaKnown RBP25.06■■□□□ 1.6
PDLIM1-202ENST00000477757 TMOD4Q9NZQ9 345 aa25.06■■□□□ 1.6
PDLIM1-202ENST00000477757 LDHCP07864 332 aa25.05■■□□□ 1.6
PDLIM1-202ENST00000477757 CCND3P30281 292 aaPredicted RBP25.05■■□□□ 1.6
PDLIM1-202ENST00000477757 APBA2Q99767 749 aa25.05■■□□□ 1.6
PDLIM1-202ENST00000477757 ASNSP08243 561 aa25.04■■□□□ 1.6
PDLIM1-202ENST00000477757 RGS2P41220 211 aa25.04■■□□□ 1.6
PDLIM1-202ENST00000477757 ALDH1L2Q3SY69 923 aa25.04■■□□□ 1.6
PDLIM1-202ENST00000477757 HMG20BQ9P0W2 317 aa25.04■■□□□ 1.6
PDLIM1-202ENST00000477757 ERVK-9P63128 1117 aa25.03■■□□□ 1.6
PDLIM1-202ENST00000477757 ERVK-24P63145 666 aa25.03■■□□□ 1.6
PDLIM1-202ENST00000477757 CCL14Q16627 93 aa25.03■■□□□ 1.6
PDLIM1-202ENST00000477757 MORN1Q5T089 497 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms