RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 SENP2Q9HC62 589 aa20.8■□□□□ 0.92
CCM2-209ENST00000477605 EPB41L4AQ9HCS5 686 aaPredicted RBP20.8■□□□□ 0.92
CCM2-209ENST00000477605 MMP1P03956 469 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 RILPL1Q5EBL4 403 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 MFSD6Q6ZSS7 791 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 METTL16Q86W50 562 aaKnown RBP20.79■□□□□ 0.92
CCM2-209ENST00000477605 ZNF579Q8NAF0 562 aaKnown RBP20.79■□□□□ 0.92
CCM2-209ENST00000477605 SLC26A6Q9BXS9 759 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 A0A0G2JS52 829 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 SPDYE4A6NLX3 237 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 SERPINC1P01008 464 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 RXRAP19793 462 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 VSTM4Q8IW00 320 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 DACH1Q9UI36 760 aa20.79■□□□□ 0.92
CCM2-209ENST00000477605 TIAM2Q8IVF5 1701 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 MBD4O95243 580 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 MDM2Q00987 491 aaPredicted RBP20.78■□□□□ 0.92
CCM2-209ENST00000477605 PNOCQ13519 176 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 PPP2R5BQ15173 497 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 LONRF3Q496Y0 759 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 CCDC93Q567U6 631 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
CCM2-209ENST00000477605 ANKRD36CQ5JPF3 1778 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 PHLPP2Q6ZVD8 1323 aa20.78■□□□□ 0.92
CCM2-209ENST00000477605 GSG1L2A8MUP6 293 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 PTPREP23469 700 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 NT5DC1Q5TFE4 455 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 KANK3Q6NY19 840 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 KRT27Q7Z3Y8 459 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 DZIP3Q86Y13 1208 aaKnown RBP20.77■□□□□ 0.92
CCM2-209ENST00000477605 MAGEB6Q8N7X4 407 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 ZBTB1Q9Y2K1 713 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 ARAP2Q8WZ64 1704 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 ATP1A3P13637 1013 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 NAA30Q147X3 362 aaPredicted RBP20.77■□□□□ 0.92
CCM2-209ENST00000477605 RTN1Q16799 776 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 TRIML1Q8N9V2 468 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 MLKLQ8NB16 471 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 CLIC6Q96NY7 704 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 PRDM10Q9NQV6 1147 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 CEP131Q9UPN4 1083 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 PCDHA5Q9Y5H7 936 aa20.77■□□□□ 0.92
CCM2-209ENST00000477605 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.91
CCM2-209ENST00000477605 ERICH2A1L162 156 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 DEXIO95424 95 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 ETF1P62495 437 aaKnown RBP20.76■□□□□ 0.91
CCM2-209ENST00000477605 RASGRF1Q13972 1273 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 CT47A1Q5JQC4 288 aaPredicted RBP20.76■□□□□ 0.91
CCM2-209ENST00000477605 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 DISP2A7MBM2 1401 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 GABPB1Q06547 395 aaPredicted RBP20.76■□□□□ 0.91
CCM2-209ENST00000477605 WTAPQ15007 396 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 CFAP100Q494V2 611 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 MYH3P11055 1940 aa20.76■□□□□ 0.91
CCM2-209ENST00000477605 TOP1P11387 765 aaKnown RBP20.75■□□□□ 0.91
CCM2-209ENST00000477605 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
CCM2-209ENST00000477605 ISM2Q6H9L7 571 aa20.75■□□□□ 0.91
CCM2-209ENST00000477605 FOXP4Q8IVH2 680 aaPredicted RBP20.75■□□□□ 0.91
CCM2-209ENST00000477605 DIS3L2Q8IYB7 885 aaKnown RBP20.75■□□□□ 0.91
CCM2-209ENST00000477605 STK11IPQ8N1F8 1099 aa20.75■□□□□ 0.91
CCM2-209ENST00000477605 SRRTQ9BXP5 876 aaKnown RBP20.75■□□□□ 0.91
CCM2-209ENST00000477605 ARMT1Q9H993 441 aa20.75■□□□□ 0.91
CCM2-209ENST00000477605 RTL9Q8NET4 1388 aa20.75■□□□□ 0.91
CCM2-209ENST00000477605 ZSCAN12O43309 604 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 SYT10Q6XYQ8 523 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 CRACR2BQ8N4Y2 399 aaPredicted RBP20.74■□□□□ 0.91
CCM2-209ENST00000477605 FBXO2Q9UK22 296 aaPredicted RBP20.74■□□□□ 0.91
CCM2-209ENST00000477605 BTBD18B2RXH4 712 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 KIF20AO95235 890 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 SARSP49591 514 aaKnown RBP20.74■□□□□ 0.91
CCM2-209ENST00000477605 TOB1P50616 345 aaPredicted RBP20.74■□□□□ 0.91
CCM2-209ENST00000477605 KMT5BQ4FZB7 885 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 ENOX1Q8TC92 643 aaKnown RBP20.74■□□□□ 0.91
CCM2-209ENST00000477605 MPHOSPH8Q99549 860 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 MYL10Q9BUA6 226 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 FANCLQ9NW38 375 aa20.74■□□□□ 0.91
CCM2-209ENST00000477605 GOLGA6L9A6NEM1 432 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 TDO2P48775 406 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 POSTNQ15063 836 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 BARGINQ6ZT62 677 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 DPF2Q92785 391 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 CCDC34Q96HJ3 373 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 FAM53CQ9NYF3 392 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCM2-209ENST00000477605 SRPRBQ9Y5M8 271 aaKnown RBP20.73■□□□□ 0.91
CCM2-209ENST00000477605 ARHGAP6O43182 974 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 HOMER1Q86YM7 354 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 TACC3Q9Y6A5 838 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 SLC4A4Q9Y6R1 1079 aa20.73■□□□□ 0.91
CCM2-209ENST00000477605 TBX2Q13207 712 aaPredicted RBP20.72■□□□□ 0.91
CCM2-209ENST00000477605 PARP10Q53GL7 1025 aa20.72■□□□□ 0.91
CCM2-209ENST00000477605 HELBQ8NG08 1087 aaPredicted RBP20.72■□□□□ 0.91
CCM2-209ENST00000477605 INCENPQ9NQS7 918 aa20.72■□□□□ 0.91
CCM2-209ENST00000477605 ANAPC4Q9UJX5 808 aa20.72■□□□□ 0.91
CCM2-209ENST00000477605 MAN1B1Q9UKM7 699 aa20.72■□□□□ 0.91
CCM2-209ENST00000477605 MORC3Q14149 939 aa20.71■□□□□ 0.91
CCM2-209ENST00000477605 ELF2Q15723 593 aa20.71■□□□□ 0.91
CCM2-209ENST00000477605 CCDC125Q86Z20 511 aa20.71■□□□□ 0.91
CCM2-209ENST00000477605 KRT222Q8N1A0 295 aa20.71■□□□□ 0.91
CCM2-209ENST00000477605 FANCBQ8NB91 859 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms