RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 GSG1L2A8MUP6 293 aa18.32■□□□□ 0.52
SEC13-215ENST00000477547 FOXP2O15409 715 aa18.32■□□□□ 0.52
SEC13-215ENST00000477547 CA12O43570 354 aa18.32■□□□□ 0.52
SEC13-215ENST00000477547 CDAN1Q8IWY9 1227 aa18.32■□□□□ 0.52
SEC13-215ENST00000477547 ZIC5Q96T25 663 aa18.32■□□□□ 0.52
SEC13-215ENST00000477547 NACAP1Q9BZK3 213 aa18.32■□□□□ 0.52
SEC13-215ENST00000477547 PDE4DIPQ5VU43 2346 aa18.32■□□□□ 0.52
SEC13-215ENST00000477547 SLC4A8Q2Y0W8 1093 aa18.31■□□□□ 0.52
SEC13-215ENST00000477547 ZFPM1Q8IX07 1006 aa18.31■□□□□ 0.52
SEC13-215ENST00000477547 CDCA5Q96FF9 252 aa18.31■□□□□ 0.52
SEC13-215ENST00000477547 NAPBQ9H115 298 aa18.31■□□□□ 0.52
SEC13-215ENST00000477547 ZNF408Q9H9D4 720 aa18.31■□□□□ 0.52
SEC13-215ENST00000477547 MCM9Q9NXL9 1143 aa18.31■□□□□ 0.52
SEC13-215ENST00000477547 ARPP21Q9UBL0 812 aaPredicted RBP18.31■□□□□ 0.52
SEC13-215ENST00000477547 ZMYM6O95789 1325 aa18.31■□□□□ 0.52
SEC13-215ENST00000477547 PATL2C9JE40 543 aaKnown RBP18.3■□□□□ 0.52
SEC13-215ENST00000477547 HSPD1P10809 573 aaKnown RBP18.3■□□□□ 0.52
SEC13-215ENST00000477547 GIMAP6Q6P9H5 292 aa18.3■□□□□ 0.52
SEC13-215ENST00000477547 DLK2Q6UY11 383 aa18.3■□□□□ 0.52
SEC13-215ENST00000477547 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
SEC13-215ENST00000477547 TEPSINQ96N21 525 aa18.3■□□□□ 0.52
SEC13-215ENST00000477547 CSRNP1Q96S65 589 aa18.3■□□□□ 0.52
SEC13-215ENST00000477547 ANO2Q9NQ90 1003 aa18.3■□□□□ 0.52
SEC13-215ENST00000477547 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
SEC13-215ENST00000477547 HLA-DOAP06340 250 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 SOX10P56693 466 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 PRAMEF18Q5VWM3 479 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 SH3BP5LQ7L8J4 393 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 IFNL3Q8IZI9 196 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 DSCC1Q9BVC3 393 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 DHX36Q9H2U1 1008 aaKnown RBP18.29■□□□□ 0.52
SEC13-215ENST00000477547 PALD1Q9ULE6 856 aa18.29■□□□□ 0.52
SEC13-215ENST00000477547 POLR3DP05423 398 aaPredicted RBP18.28■□□□□ 0.52
SEC13-215ENST00000477547 ROBO3Q96MS0 1386 aa18.27■□□□□ 0.52
SEC13-215ENST00000477547 CYP2D6P10635 497 aa18.27■□□□□ 0.52
SEC13-215ENST00000477547 NF2P35240 595 aa18.27■□□□□ 0.52
SEC13-215ENST00000477547 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.52
SEC13-215ENST00000477547 HHIPL1Q96JK4 782 aa18.27■□□□□ 0.52
SEC13-215ENST00000477547 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 USP17L12C9JPN9 530 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 USP17L21D6R901 530 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 PTH1RQ03431 593 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 ALX1Q15699 326 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 SUPT20HL1Q3ZLR7 823 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 CTR9Q6PD62 1173 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 TTC6Q86TZ1 520 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 HOOK2Q96ED9 719 aa18.26■□□□□ 0.51
SEC13-215ENST00000477547 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
SEC13-215ENST00000477547 GREB1LQ9C091 1923 aaPredicted RBP18.26■□□□□ 0.51
SEC13-215ENST00000477547 REC8O95072 547 aa18.25■□□□□ 0.51
SEC13-215ENST00000477547 EVX2Q03828 476 aa18.25■□□□□ 0.51
SEC13-215ENST00000477547 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
SEC13-215ENST00000477547 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
SEC13-215ENST00000477547 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
SEC13-215ENST00000477547 PI4KBQ9UBF8 816 aa18.25■□□□□ 0.51
SEC13-215ENST00000477547 FAM196BA6NMK8 535 aa18.24■□□□□ 0.51
SEC13-215ENST00000477547 MINDY4BA8MYZ0 360 aa18.24■□□□□ 0.51
SEC13-215ENST00000477547 FGAP02671 866 aa18.24■□□□□ 0.51
SEC13-215ENST00000477547 SBK1Q52WX2 424 aa18.24■□□□□ 0.51
SEC13-215ENST00000477547 C12orf60Q5U649 245 aa18.24■□□□□ 0.51
SEC13-215ENST00000477547 DCAF15Q66K64 600 aa18.24■□□□□ 0.51
SEC13-215ENST00000477547 EHD4Q9H223 541 aa18.24■□□□□ 0.51
SEC13-215ENST00000477547 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
SEC13-215ENST00000477547 PLCD1P51178 756 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 PPARAQ07869 468 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 CTNNA3Q9UI47 895 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 SERPINB13Q9UIV8 391 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
SEC13-215ENST00000477547 SMIM22K7EJ46 135 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 HUNKP57058 714 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 HAND2P61296 217 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 NOGQ13253 232 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 PRKG1Q13976 671 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
SEC13-215ENST00000477547 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.23■□□□□ 0.51
SEC13-215ENST00000477547 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
SEC13-215ENST00000477547 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
SEC13-215ENST00000477547 MYH4Q9Y623 1939 aa18.22■□□□□ 0.51
SEC13-215ENST00000477547 IMMTQ16891 758 aaKnown RBP18.22■□□□□ 0.51
SEC13-215ENST00000477547 STK11IPQ8N1F8 1099 aa18.22■□□□□ 0.51
SEC13-215ENST00000477547 SLC44A5Q8NCS7 719 aa18.22■□□□□ 0.51
SEC13-215ENST00000477547 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
SEC13-215ENST00000477547 DYNLL2Q96FJ2 89 aa18.22■□□□□ 0.51
SEC13-215ENST00000477547 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
SEC13-215ENST00000477547 FZD1Q9UP38 647 aa18.22■□□□□ 0.51
SEC13-215ENST00000477547 PTPRFP10586 1907 aa18.21■□□□□ 0.51
SEC13-215ENST00000477547 PPP1R12BO60237 982 aaPredicted RBP18.21■□□□□ 0.51
SEC13-215ENST00000477547 EIF5BO60841 1220 aaKnown RBP18.21■□□□□ 0.51
SEC13-215ENST00000477547 SLC3A2P08195 630 aaKnown RBP18.21■□□□□ 0.51
SEC13-215ENST00000477547 CTDSPL2Q05D32 466 aa18.21■□□□□ 0.51
SEC13-215ENST00000477547 GABPAQ06546 454 aa18.21■□□□□ 0.51
SEC13-215ENST00000477547 C16orf86Q6ZW13 317 aa18.21■□□□□ 0.51
SEC13-215ENST00000477547 GBA2Q9HCG7 927 aaPredicted RBP18.21■□□□□ 0.51
SEC13-215ENST00000477547 SWAP70Q9UH65 585 aa18.21■□□□□ 0.51
SEC13-215ENST00000477547 ANGEL1Q9UNK9 670 aaKnown RBP18.21■□□□□ 0.51
SEC13-215ENST00000477547 ZNF213O14771 459 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms