RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 IRF5Q13568 498 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 RASGRF1Q13972 1273 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 FAM110CQ1W6H9 321 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 CCAR1Q8IX12 1150 aaKnown RBP8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 NEUROD6Q96NK8 337 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 NOL10Q9BSC4 688 aaKnown RBP8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 CWC22Q9HCG8 908 aaKnown RBP8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 SLC45A1Q9Y2W3 748 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 GAKO14976 1311 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 RFX7Q2KHR2 1363 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 A0A1B0GUL7 405 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 E9PSI1 815 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 TIMM10P62072 90 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 IRX3P78415 501 aaPredicted RBP8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 MECOMQ03112 1051 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 TRIM32Q13049 653 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 TRIM34Q9BYJ4 488 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 HMX1Q9NP08 348 aaPredicted RBP8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 PAK6Q9NQU5 681 aaPredicted RBP8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 RAI14Q9P0K7 980 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 FBXO3Q9UK99 471 aa8.26□□□□□ -1.09
RTFDC1-206ENST00000477485 MYH8P13535 1937 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 CYP2B6P20813 491 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 GCLCP48506 637 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 GSTO1P78417 241 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 TFCP2Q12800 502 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 MVPQ14764 893 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 TBC1D9Q6ZT07 1266 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 Q7L0L9 218 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 TEX11Q8IYF3 940 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 DEFB123Q8N688 67 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 PROCA1Q8NCQ7 364 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 XAGE2Q96GT9 111 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 NBPF3Q9H094 633 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 CRISPLD2Q9H0B8 497 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 OSBPL5Q9H0X9 879 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 ASCC2Q9H1I8 757 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 C11orf49Q9H6J7 331 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 AS3MTQ9HBK9 375 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 TMOD4Q9NZQ9 345 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 NOB1Q9ULX3 412 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 RPTORQ8N122 1335 aa8.25□□□□□ -1.09
RTFDC1-206ENST00000477485 USP17L5A8MUK1 530 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 SRGAP3O43295 1099 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 LDHCP07864 332 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 CAPN2P17655 700 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 CAP2P40123 477 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 MTMR2Q13614 643 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 PDE3AQ14432 1141 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 ALDH1L2Q3SY69 923 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 PI16Q6UXB8 463 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 CRACR2BQ8N4Y2 399 aaPredicted RBP8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 ANKLE1Q8NAG6 615 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 MEIS3Q99687 375 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 PAGR1Q9BTK6 254 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 UBE2OQ9C0C9 1292 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 LRP2BPQ9P2M1 347 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 RANBP2P49792 3224 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 ZNF521Q96K83 1311 aa8.24□□□□□ -1.09
RTFDC1-206ENST00000477485 GPR75-ASB3A0A0A6YYF3 556 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 PEX10O60683 326 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 PRKAR2AP13861 404 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 ZKSCAN1P17029 563 aaPredicted RBP8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 MAGEA10P43363 369 aaPredicted RBP8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 RHBDL3P58872 404 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 WDR78Q5VTH9 848 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 SH3RF3Q8TEJ3 882 aaPredicted RBP8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 TRIB2Q92519 343 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 CDCA7LQ96GN5 454 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 GDF15Q99988 308 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 NUDT12Q9BQG2 462 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 TBC1D2Q9BYX2 928 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 API5Q9BZZ5 524 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 COPRSQ9NQ92 184 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 AATFQ9NY61 560 aaKnown RBP eCLIP8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 HMG20BQ9P0W2 317 aa8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 PDS5AQ29RF7 1337 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-206ENST00000477485 NAV1Q8NEY1 1877 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 COL2A1P02458 1487 aaPredicted RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 ZNF316A6NFI3 1004 aaPredicted RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 TBC1D12O60347 775 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 GDF11O95390 407 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 MDM2Q00987 491 aaPredicted RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 SLFN5Q08AF3 891 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 ZYXQ15942 572 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 MAPKAPK5Q8IW41 473 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 TDHQ8IZJ6 230 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 GPRC5AQ8NFJ5 357 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 NSUN4Q96CB9 384 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 FAM163AQ96GL9 167 aaPredicted RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 FEZ1Q99689 392 aa8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms