RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
TMEM254-211ENST00000476173 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 MCM9Q9NXL9 1143 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 PPP2R3BQ9Y5P8 575 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
TMEM254-211ENST00000476173 ZMYM6O95789 1325 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 DDX60LQ5H9U9 1706 aaKnown RBP11.67□□□□□ -0.54
TMEM254-211ENST00000476173 CYP2D7A0A087X1C5 515 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 SMIM22K7EJ46 135 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
TMEM254-211ENST00000476173 CYP2D6P10635 497 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 PLCD1P51178 756 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 EVX2Q03828 476 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 SLC4A8Q2Y0W8 1093 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 C12orf60Q5U649 245 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 PRAMEF18Q5VWM3 479 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 USP26Q9BXU7 913 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 NAPBQ9H115 298 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 DHX36Q9H2U1 1008 aaKnown RBP11.67□□□□□ -0.54
TMEM254-211ENST00000476173 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
TMEM254-211ENST00000476173 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
TMEM254-211ENST00000476173 MINDY4BA8MYZ0 360 aa11.66□□□□□ -0.54
TMEM254-211ENST00000476173 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 PPARAQ07869 468 aa11.66□□□□□ -0.54
TMEM254-211ENST00000476173 NECTIN1Q15223 517 aa11.66□□□□□ -0.54
TMEM254-211ENST00000476173 NBPF12Q5TAG4 269 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 METTL16Q86W50 562 aaKnown RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 ZSCAN29Q8IWY8 852 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
TMEM254-211ENST00000476173 PI4KBQ9UBF8 816 aa11.66□□□□□ -0.54
TMEM254-211ENST00000476173 ARPP21Q9UBL0 812 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-211ENST00000476173 TRAF5O00463 557 aa11.65□□□□□ -0.54
TMEM254-211ENST00000476173 ITGBL1O95965 494 aaPredicted RBP11.65□□□□□ -0.54
TMEM254-211ENST00000476173 SLURP2P0DP57 97 aa11.65□□□□□ -0.54
TMEM254-211ENST00000476173 MAP3K10Q02779 954 aa11.65□□□□□ -0.54
TMEM254-211ENST00000476173 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
TMEM254-211ENST00000476173 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
TMEM254-211ENST00000476173 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
TMEM254-211ENST00000476173 EHD4Q9H223 541 aa11.65□□□□□ -0.54
TMEM254-211ENST00000476173 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
TMEM254-211ENST00000476173 SIPA1L1O43166 1804 aa11.65□□□□□ -0.55
TMEM254-211ENST00000476173 ZNF213O14771 459 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 TBC1D12O60347 775 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 TOMM70O94826 608 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 HLA-DOAP06340 250 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 CYP21A2P08686 494 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 HSPA4P34932 840 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 HAND2P61296 217 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 GABPAQ06546 454 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 IMMTQ16891 758 aaKnown RBP11.64□□□□□ -0.55
TMEM254-211ENST00000476173 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 RBM46Q8TBY0 533 aaKnown RBP11.64□□□□□ -0.55
TMEM254-211ENST00000476173 CDCA5Q96FF9 252 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 DYNLL2Q96FJ2 89 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 NBPF3Q9H094 633 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 SERPINB13Q9UIV8 391 aa11.64□□□□□ -0.55
TMEM254-211ENST00000476173 SSC5DA1L4H1 1573 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 LAMA4Q16363 1823 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 SLC27A2O14975 620 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 CTDSPL2Q05D32 466 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 FMR1Q06787 632 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM254-211ENST00000476173 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 MIGA2Q7L4E1 593 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 TBC1D10CQ8IV04 446 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 SLC44A5Q8NCS7 719 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 KCNB2Q92953 911 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 DNAJC18Q9H819 358 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 INCENPQ9NQS7 918 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 HERC5Q9UII4 1024 aaKnown RBP11.63□□□□□ -0.55
TMEM254-211ENST00000476173 TACC3Q9Y6A5 838 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 TAF6LQ9Y6J9 622 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 LAMB1P07942 1786 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 ROBO3Q96MS0 1386 aa11.63□□□□□ -0.55
TMEM254-211ENST00000476173 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 SLC3A2P08195 630 aaKnown RBP11.62□□□□□ -0.55
TMEM254-211ENST00000476173 FGRP09769 529 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 SHMT1P34896 483 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 CDK8P49336 464 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 AKNAD1Q5T1N1 836 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 C16orf86Q6ZW13 317 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 CRACR2BQ8N4Y2 399 aaPredicted RBP11.62□□□□□ -0.55
TMEM254-211ENST00000476173 HOOK2Q96ED9 719 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
TMEM254-211ENST00000476173 PHF20L1A8MW92 1017 aa11.61□□□□□ -0.55
TMEM254-211ENST00000476173 PCP11498 1178 aaKnown RBP11.61□□□□□ -0.55
TMEM254-211ENST00000476173 RRP1BQ14684 758 aaKnown RBP11.61□□□□□ -0.55
TMEM254-211ENST00000476173 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
TMEM254-211ENST00000476173 DCAF15Q66K64 600 aa11.61□□□□□ -0.55
TMEM254-211ENST00000476173 TATDN1Q6P1N9 297 aa11.61□□□□□ -0.55
TMEM254-211ENST00000476173 MFSD6Q6ZSS7 791 aa11.61□□□□□ -0.55
TMEM254-211ENST00000476173 STOX1Q6ZVD7 989 aa11.61□□□□□ -0.55
TMEM254-211ENST00000476173 STAG1Q8WVM7 1258 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms