RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 INPP5BP32019 993 aa17.41■□□□□ 0.38
ABCF3-211ENST00000475728 GTF2A2P52657 109 aa17.41■□□□□ 0.38
ABCF3-211ENST00000475728 OTUD7BQ6GQQ9 843 aa17.41■□□□□ 0.38
ABCF3-211ENST00000475728 TTC6Q86TZ1 520 aa17.41■□□□□ 0.38
ABCF3-211ENST00000475728 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
ABCF3-211ENST00000475728 CRACR2BQ8N4Y2 399 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-211ENST00000475728 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
ABCF3-211ENST00000475728 MYO5AQ9Y4I1 1855 aaKnown RBP17.4■□□□□ 0.38
ABCF3-211ENST00000475728 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 RNF113AO15541 343 aaKnown RBP17.4■□□□□ 0.38
ABCF3-211ENST00000475728 MBD4O95243 580 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 PPATQ06203 517 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 PPIL2Q13356 520 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 APPBP2Q92624 585 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 FSD1Q9BTV5 496 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 ATP8A2Q9NTI2 1148 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 PALD1Q9ULE6 856 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 AK9Q5TCS8 1911 aa17.4■□□□□ 0.38
ABCF3-211ENST00000475728 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.37
ABCF3-211ENST00000475728 LCORLQ8N3X6 602 aa17.39■□□□□ 0.37
ABCF3-211ENST00000475728 EVI5LQ96CN4 794 aa17.39■□□□□ 0.37
ABCF3-211ENST00000475728 ARMT1Q9H993 441 aa17.39■□□□□ 0.37
ABCF3-211ENST00000475728 RNF186Q9NXI6 227 aa17.39■□□□□ 0.37
ABCF3-211ENST00000475728 SAP30BPQ9UHR5 308 aaKnown RBP17.39■□□□□ 0.37
ABCF3-211ENST00000475728 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
ABCF3-211ENST00000475728 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
ABCF3-211ENST00000475728 CETPP11597 493 aa17.38■□□□□ 0.37
ABCF3-211ENST00000475728 GJA5P36382 358 aa17.38■□□□□ 0.37
ABCF3-211ENST00000475728 SNAPC2Q13487 334 aa17.38■□□□□ 0.37
ABCF3-211ENST00000475728 METTL16Q86W50 562 aaKnown RBP17.38■□□□□ 0.37
ABCF3-211ENST00000475728 EHD4Q9H223 541 aa17.38■□□□□ 0.37
ABCF3-211ENST00000475728 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
ABCF3-211ENST00000475728 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
ABCF3-211ENST00000475728 TESPA1A2RU30 521 aaPredicted RBP17.37■□□□□ 0.37
ABCF3-211ENST00000475728 TRPA1O75762 1119 aa17.37■□□□□ 0.37
ABCF3-211ENST00000475728 POLR3DP05423 398 aaPredicted RBP17.37■□□□□ 0.37
ABCF3-211ENST00000475728 NEFLP07196 543 aa17.37■□□□□ 0.37
ABCF3-211ENST00000475728 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
ABCF3-211ENST00000475728 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
ABCF3-211ENST00000475728 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
ABCF3-211ENST00000475728 SERPINB13Q9UIV8 391 aa17.37■□□□□ 0.37
ABCF3-211ENST00000475728 GNAT2P19087 354 aa17.36■□□□□ 0.37
ABCF3-211ENST00000475728 CAP2P40123 477 aa17.36■□□□□ 0.37
ABCF3-211ENST00000475728 IFNL1Q8IU54 200 aa17.36■□□□□ 0.37
ABCF3-211ENST00000475728 PLEKHM2Q8IWE5 1019 aa17.36■□□□□ 0.37
ABCF3-211ENST00000475728 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
ABCF3-211ENST00000475728 MCOLN1Q9GZU1 580 aa17.36■□□□□ 0.37
ABCF3-211ENST00000475728 PUS7LQ9H0K6 701 aaKnown RBP17.36■□□□□ 0.37
ABCF3-211ENST00000475728 DCP1AQ9NPI6 582 aaPredicted RBP17.36■□□□□ 0.37
ABCF3-211ENST00000475728 SLC4A4Q9Y6R1 1079 aa17.36■□□□□ 0.37
ABCF3-211ENST00000475728 CCL15-CCL14A0A0B4J2E2 113 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 CXCL11O14625 94 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 IRF6O14896 467 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 PTPRAP18433 802 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 CCL15Q16663 113 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 SLFNL1Q499Z3 407 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 SDR42E1Q8WUS8 393 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 MS4A4AQ96JQ5 239 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 CFHR5Q9BXR6 569 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 KCNH4Q9UQ05 1017 aa17.35■□□□□ 0.37
ABCF3-211ENST00000475728 TRIM6-TRIM34B2RNG4 842 aa17.34■□□□□ 0.37
ABCF3-211ENST00000475728 ASNSP08243 561 aa17.34■□□□□ 0.37
ABCF3-211ENST00000475728 FOCADQ5VW36 1801 aa17.34■□□□□ 0.37
ABCF3-211ENST00000475728 GIMAP6Q6P9H5 292 aa17.34■□□□□ 0.37
ABCF3-211ENST00000475728 OSBP2Q969R2 916 aa17.34■□□□□ 0.37
ABCF3-211ENST00000475728 STRBPQ96SI9 672 aaKnown RBP17.34■□□□□ 0.37
ABCF3-211ENST00000475728 ZCCHC17Q9NP64 241 aaKnown RBP17.34■□□□□ 0.37
ABCF3-211ENST00000475728 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
ABCF3-211ENST00000475728 GPAA1O43292 621 aa17.33■□□□□ 0.36
ABCF3-211ENST00000475728 ZMYM1Q5SVZ6 1142 aa17.33■□□□□ 0.36
ABCF3-211ENST00000475728 BRI3BPQ8WY22 251 aa17.33■□□□□ 0.36
ABCF3-211ENST00000475728 AS3MTQ9HBK9 375 aa17.33■□□□□ 0.36
ABCF3-211ENST00000475728 MYH7P12883 1935 aa17.33■□□□□ 0.36
ABCF3-211ENST00000475728 CASP8AP2Q9UKL3 1982 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 USP17L5A8MUK1 530 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 IGF2BP3O00425 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
ABCF3-211ENST00000475728 PRKAB2O43741 272 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 CHGBP05060 677 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 SLC4A8Q2Y0W8 1093 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 NOM1Q5C9Z4 860 aaKnown RBP17.32■□□□□ 0.36
ABCF3-211ENST00000475728 NACAP1Q9BZK3 213 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 DNAJC18Q9H819 358 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 ARPP21Q9UBL0 812 aaPredicted RBP17.32■□□□□ 0.36
ABCF3-211ENST00000475728 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
ABCF3-211ENST00000475728 CDK5RAP2Q96SN8 1893 aa17.31■□□□□ 0.36
ABCF3-211ENST00000475728 PLCD1P51178 756 aa17.31■□□□□ 0.36
ABCF3-211ENST00000475728 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
ABCF3-211ENST00000475728 FASTKD5Q7L8L6 764 aaKnown RBP17.31■□□□□ 0.36
ABCF3-211ENST00000475728 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
ABCF3-211ENST00000475728 HELLSQ9NRZ9 838 aa17.31■□□□□ 0.36
ABCF3-211ENST00000475728 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
ABCF3-211ENST00000475728 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 USP17L12C9JPN9 530 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 USP17L21D6R901 530 aa17.3■□□□□ 0.36
ABCF3-211ENST00000475728 CERKLQ49MI3 558 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-211ENST00000475728 C12orf60Q5U649 245 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms