RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 SUGT1Q9Y2Z0 365 aa12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 XIRP2A4UGR9 3374 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 DNM1LO00429 736 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 TMEM31Q5JXX7 168 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 RUNDC1Q96C34 613 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 EPHX3Q9H6B9 360 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 USP40Q9NVE5 1235 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 MORF4L1Q9UBU8 362 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
CCHCR1-212ENST00000475684 CNGA1P29973 690 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 RGS2P41220 211 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 GNAI1P63096 354 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 SLC39A5Q6ZMH5 540 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 G2E3Q7L622 706 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 LINS1Q8NG48 757 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 LPAR1Q92633 364 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 TIFAQ96CG3 184 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 IFT57Q9NWB7 429 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 ATRNL1Q5VV63 1379 aa12.67□□□□□ -0.38
CCHCR1-212ENST00000475684 TRIM43BA6NCK2 446 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 SPP2Q13103 211 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 TRIM60Q495X7 471 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 CCAR1Q8IX12 1150 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 USP6NLQ92738 828 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 TRIM43Q96BQ3 446 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 DDX20Q9UHI6 824 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 DAGLAQ9Y4D2 1042 aa12.66□□□□□ -0.38
CCHCR1-212ENST00000475684 PTPRFP10586 1907 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 MSCO60682 206 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 PEX10O60683 326 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 SLURP2P0DP57 97 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 BMP1P13497 986 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 IGFBP4P22692 258 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 MAPK4P31152 587 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 EPHB4P54760 987 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 HMGCS2P54868 508 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 GJC2Q5T442 439 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 PDLIM7Q9NR12 457 aa12.65□□□□□ -0.38
CCHCR1-212ENST00000475684 PHIPQ8WWQ0 1821 aa12.65□□□□□ -0.39
CCHCR1-212ENST00000475684 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 RGS3P49796 1198 aa12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 DNAAF4Q8WXU2 420 aa12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 P2RX7Q99572 595 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 APBA2Q99767 749 aa12.64□□□□□ -0.39
CCHCR1-212ENST00000475684 FRMPD3Q5JV73 1810 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 ENTPD3O75355 529 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 MRE11P49959 708 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 CALD1Q05682 793 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 MORN1Q5T089 497 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 SH3BP5LQ7L8J4 393 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 PLEKHH3Q7Z736 793 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 ARRDC4Q8NCT1 418 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 CXXC1Q9P0U4 656 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
CCHCR1-212ENST00000475684 DOCK2Q92608 1830 aa12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 ITGB8P26012 769 aa12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 FKBP5Q13451 457 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 ADGRE1Q14246 886 aa12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 CCDC129Q6ZRS4 1044 aa12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 EDC3Q96F86 508 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 REV3LO60673 3130 aa12.62□□□□□ -0.39
CCHCR1-212ENST00000475684 LOC285556D6RIA3 1793 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 DDTLA6NHG4 134 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 GPR37L1O60883 481 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 RAG1P15918 1043 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 PBX2P40425 430 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 HERVK_113P62684 666 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 TFF2Q03403 129 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 FPGSQ05932 587 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 SNX17Q15036 470 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 AAK1Q2M2I8 961 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 Q3C1V9 767 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 IDI2Q9BXS1 227 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms