RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
FAM3A-218ENST00000475657 FAM161BQ96MY7 647 aa17.43■□□□□ 0.38
FAM3A-218ENST00000475657 CDX2Q99626 313 aaPredicted RBP17.43■□□□□ 0.38
FAM3A-218ENST00000475657 LBHD1Q9BQE6 289 aaPredicted RBP17.43■□□□□ 0.38
FAM3A-218ENST00000475657 GAKO14976 1311 aa17.43■□□□□ 0.38
FAM3A-218ENST00000475657 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
FAM3A-218ENST00000475657 DDTLA6NHG4 134 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-218ENST00000475657 SEMA3EO15041 775 aa17.42■□□□□ 0.38
FAM3A-218ENST00000475657 SPP2Q13103 211 aa17.42■□□□□ 0.38
FAM3A-218ENST00000475657 ZNF280CQ8ND82 737 aa17.42■□□□□ 0.38
FAM3A-218ENST00000475657 MAFAQ8NHW3 353 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-218ENST00000475657 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-218ENST00000475657 NUDT12Q9BQG2 462 aa17.42■□□□□ 0.38
FAM3A-218ENST00000475657 ASCC2Q9H1I8 757 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-218ENST00000475657 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
FAM3A-218ENST00000475657 EYSQ5T1H1 3165 aa17.42■□□□□ 0.38
FAM3A-218ENST00000475657 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
FAM3A-218ENST00000475657 CYP2B6P20813 491 aa17.41■□□□□ 0.38
FAM3A-218ENST00000475657 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
FAM3A-218ENST00000475657 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
FAM3A-218ENST00000475657 OSBPL5Q9H0X9 879 aaPredicted RBP17.41■□□□□ 0.38
FAM3A-218ENST00000475657 DOCK2Q92608 1830 aa17.41■□□□□ 0.38
FAM3A-218ENST00000475657 DOCK1Q14185 1865 aa17.41■□□□□ 0.38
FAM3A-218ENST00000475657 EYA2O00167 538 aa17.4■□□□□ 0.38
FAM3A-218ENST00000475657 CACNB2Q08289 660 aaPredicted RBP17.4■□□□□ 0.38
FAM3A-218ENST00000475657 CCDC84Q86UT8 332 aaPredicted RBP17.4■□□□□ 0.38
FAM3A-218ENST00000475657 KLHDC4Q8TBB5 520 aa17.4■□□□□ 0.38
FAM3A-218ENST00000475657 SEMA6BQ9H3T3 888 aa17.4■□□□□ 0.38
FAM3A-218ENST00000475657 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
FAM3A-218ENST00000475657 SLURP2P0DP57 97 aa17.39■□□□□ 0.37
FAM3A-218ENST00000475657 HMGCS2P54868 508 aa17.39■□□□□ 0.37
FAM3A-218ENST00000475657 SLF2Q8IX21 1173 aa17.39■□□□□ 0.37
FAM3A-218ENST00000475657 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
FAM3A-218ENST00000475657 USP6NLQ92738 828 aa17.39■□□□□ 0.37
FAM3A-218ENST00000475657 DDX4Q9NQI0 724 aaKnown RBP17.39■□□□□ 0.37
FAM3A-218ENST00000475657 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.39■□□□□ 0.37
FAM3A-218ENST00000475657 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
FAM3A-218ENST00000475657 GPRC5AQ8NFJ5 357 aa17.38■□□□□ 0.37
FAM3A-218ENST00000475657 PLXNB2O15031 1838 aa17.37■□□□□ 0.37
FAM3A-218ENST00000475657 MUC3AQ02505 3323 aa17.37■□□□□ 0.37
FAM3A-218ENST00000475657 MAPK4P31152 587 aa17.37■□□□□ 0.37
FAM3A-218ENST00000475657 HOXA7P31268 230 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-218ENST00000475657 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.37■□□□□ 0.37
FAM3A-218ENST00000475657 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
FAM3A-218ENST00000475657 LOC285556D6RIA3 1793 aa17.37■□□□□ 0.37
FAM3A-218ENST00000475657 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 COL9A1P20849 921 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 CCND3P30281 292 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-218ENST00000475657 CAP2P40123 477 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 RGS2P41220 211 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-218ENST00000475657 PDE3AQ14432 1141 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
FAM3A-218ENST00000475657 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-218ENST00000475657 IRX3P78415 501 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-218ENST00000475657 SMAD3P84022 425 aaKnown RBP17.35■□□□□ 0.37
FAM3A-218ENST00000475657 PICALMQ13492 652 aa17.35■□□□□ 0.37
FAM3A-218ENST00000475657 ATP2B3Q16720 1220 aa17.35■□□□□ 0.37
FAM3A-218ENST00000475657 MORN1Q5T089 497 aa17.35■□□□□ 0.37
FAM3A-218ENST00000475657 ATG9AQ7Z3C6 839 aa17.35■□□□□ 0.37
FAM3A-218ENST00000475657 P2RX7Q99572 595 aaKnown RBP17.35■□□□□ 0.37
FAM3A-218ENST00000475657 WDR18Q9BV38 432 aa17.35■□□□□ 0.37
FAM3A-218ENST00000475657 SENP6Q9GZR1 1112 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-218ENST00000475657 PRKAG2Q9UGJ0 569 aa17.35■□□□□ 0.37
FAM3A-218ENST00000475657 GPR75-ASB3A0A0A6YYF3 556 aa17.34■□□□□ 0.37
FAM3A-218ENST00000475657 MSCO60682 206 aa17.34■□□□□ 0.37
FAM3A-218ENST00000475657 BTDP43251 543 aa17.34■□□□□ 0.37
FAM3A-218ENST00000475657 RHBDL3P58872 404 aa17.34■□□□□ 0.37
FAM3A-218ENST00000475657 PDS5AQ29RF7 1337 aaKnown RBP17.34■□□□□ 0.37
FAM3A-218ENST00000475657 DZIP1Q86YF9 867 aaKnown RBP17.34■□□□□ 0.37
FAM3A-218ENST00000475657 GTF3C2Q8WUA4 911 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-218ENST00000475657 APBA2Q99767 749 aa17.34■□□□□ 0.37
FAM3A-218ENST00000475657 TXNRD2Q9NNW7 524 aa17.34■□□□□ 0.37
FAM3A-218ENST00000475657 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 CIAO1O76071 339 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 PHKA1P46020 1223 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 BACE1P56817 501 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 HERVK_113P62684 666 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 SHHQ15465 462 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 SPTY2D1Q68D10 685 aaPredicted RBP17.33■□□□□ 0.36
FAM3A-218ENST00000475657 MYLIPQ8WY64 445 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 TTYH1Q9H313 450 aaPredicted RBP17.33■□□□□ 0.36
FAM3A-218ENST00000475657 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 RBPJLQ9UBG7 517 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 CDH23Q9H251 3354 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 MYH2Q9UKX2 1941 aa17.33■□□□□ 0.36
FAM3A-218ENST00000475657 NCOR1O75376 2440 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 DNM1LO00429 736 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 FOSL2P15408 326 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 CCL14Q16627 93 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 TJAP1Q5JTD0 557 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 GPR142Q7Z601 462 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 PLEKHH3Q7Z736 793 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 LPAR1Q92633 364 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 TMOD4Q9NZQ9 345 aa17.32■□□□□ 0.36
FAM3A-218ENST00000475657 HERC5Q9UII4 1024 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms