RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PTPRAP18433 802 aa18.94■□□□□ 0.62
CPSF3-203ENST00000475482 SP3Q02447 781 aa18.94■□□□□ 0.62
CPSF3-203ENST00000475482 ANKRD23Q86SG2 305 aa18.94■□□□□ 0.62
CPSF3-203ENST00000475482 ERO1AQ96HE7 468 aa18.94■□□□□ 0.62
CPSF3-203ENST00000475482 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
CPSF3-203ENST00000475482 TLR2O60603 784 aa18.93■□□□□ 0.62
CPSF3-203ENST00000475482 OTOP1Q7RTM1 612 aa18.93■□□□□ 0.62
CPSF3-203ENST00000475482 METTL16Q86W50 562 aaKnown RBP18.93■□□□□ 0.62
CPSF3-203ENST00000475482 LRRCC1Q9C099 1032 aa18.93■□□□□ 0.62
CPSF3-203ENST00000475482 LNPKQ9C0E8 428 aa18.93■□□□□ 0.62
CPSF3-203ENST00000475482 DHX36Q9H2U1 1008 aaKnown RBP18.93■□□□□ 0.62
CPSF3-203ENST00000475482 AFG3L2Q9Y4W6 797 aa18.93■□□□□ 0.62
CPSF3-203ENST00000475482 NDUFB9Q9Y6M9 179 aa18.93■□□□□ 0.62
CPSF3-203ENST00000475482 ATAD5Q96QE3 1844 aa18.93■□□□□ 0.62
CPSF3-203ENST00000475482 NOL10Q9BSC4 688 aaKnown RBP18.92■□□□□ 0.62
CPSF3-203ENST00000475482 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
CPSF3-203ENST00000475482 A0A0G2JLL6 359 aaPredicted RBP18.91■□□□□ 0.62
CPSF3-203ENST00000475482 IDH1O75874 414 aaKnown RBP18.91■□□□□ 0.62
CPSF3-203ENST00000475482 CYP7A1P22680 504 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 GPAT2Q6NUI2 795 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 PRRT2Q7Z6L0 340 aaPredicted RBP18.91■□□□□ 0.62
CPSF3-203ENST00000475482 CERS3Q8IU89 383 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 CD99L2Q8TCZ2 262 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 TGFBRAP1Q8WUH2 860 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.91■□□□□ 0.62
CPSF3-203ENST00000475482 PICK1Q9NRD5 415 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 PI4KBQ9UBF8 816 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 TRIM17Q9Y577 477 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 ZHX2Q9Y6X8 837 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 FLT1P17948 1338 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 ADGRA2Q96PE1 1338 aa18.91■□□□□ 0.62
CPSF3-203ENST00000475482 MYH1P12882 1939 aa18.9■□□□□ 0.62
CPSF3-203ENST00000475482 DYNLL1P63167 89 aaKnown RBP18.9■□□□□ 0.62
CPSF3-203ENST00000475482 MAP3K12Q12852 859 aa18.9■□□□□ 0.62
CPSF3-203ENST00000475482 RRP1BQ14684 758 aaKnown RBP18.9■□□□□ 0.62
CPSF3-203ENST00000475482 C17orf99Q6UX52 265 aa18.9■□□□□ 0.62
CPSF3-203ENST00000475482 MAGEB6Q8N7X4 407 aa18.9■□□□□ 0.62
CPSF3-203ENST00000475482 FAM196BA6NMK8 535 aa18.89■□□□□ 0.61
CPSF3-203ENST00000475482 APBB1O00213 710 aa18.89■□□□□ 0.61
CPSF3-203ENST00000475482 PDHXO00330 501 aa18.89■□□□□ 0.61
CPSF3-203ENST00000475482 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
CPSF3-203ENST00000475482 CAP2P40123 477 aa18.89■□□□□ 0.61
CPSF3-203ENST00000475482 TTF1Q15361 905 aaPredicted RBP18.89■□□□□ 0.61
CPSF3-203ENST00000475482 FOXP4Q8IVH2 680 aaPredicted RBP18.89■□□□□ 0.61
CPSF3-203ENST00000475482 MAPKAPK5Q8IW41 473 aa18.89■□□□□ 0.61
CPSF3-203ENST00000475482 PTPN22Q9Y2R2 807 aa18.89■□□□□ 0.61
CPSF3-203ENST00000475482 RIOK1Q9BRS2 568 aaKnown RBP18.88■□□□□ 0.61
CPSF3-203ENST00000475482 DNAJC18Q9H819 358 aa18.88■□□□□ 0.61
CPSF3-203ENST00000475482 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
CPSF3-203ENST00000475482 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
CPSF3-203ENST00000475482 ZSWIM8A7E2V4 1837 aa18.87■□□□□ 0.61
CPSF3-203ENST00000475482 ATP5JP18859 108 aa18.87■□□□□ 0.61
CPSF3-203ENST00000475482 FASTKD5Q7L8L6 764 aaKnown RBP18.87■□□□□ 0.61
CPSF3-203ENST00000475482 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.87■□□□□ 0.61
CPSF3-203ENST00000475482 SLC45A1Q9Y2W3 748 aa18.87■□□□□ 0.61
CPSF3-203ENST00000475482 CENPFP49454 3210 aa18.87■□□□□ 0.61
CPSF3-203ENST00000475482 PDE4AP27815 886 aa18.86■□□□□ 0.61
CPSF3-203ENST00000475482 LACTBP83111 547 aaPredicted RBP18.86■□□□□ 0.61
CPSF3-203ENST00000475482 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
CPSF3-203ENST00000475482 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
CPSF3-203ENST00000475482 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
CPSF3-203ENST00000475482 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
CPSF3-203ENST00000475482 DDX60LQ5H9U9 1706 aaKnown RBP18.86■□□□□ 0.61
CPSF3-203ENST00000475482 TCRBV5S4A2TA0A5A2 114 aa18.85■□□□□ 0.61
CPSF3-203ENST00000475482 PDE6AP16499 860 aa18.85■□□□□ 0.61
CPSF3-203ENST00000475482 MLLT1Q03111 559 aaPredicted RBP18.85■□□□□ 0.61
CPSF3-203ENST00000475482 ARHGEF6Q15052 776 aa18.85■□□□□ 0.61
CPSF3-203ENST00000475482 CCDC84Q86UT8 332 aaPredicted RBP18.85■□□□□ 0.61
CPSF3-203ENST00000475482 SKAP1Q86WV1 359 aa18.85■□□□□ 0.61
CPSF3-203ENST00000475482 HAUS7Q99871 368 aa18.85■□□□□ 0.61
CPSF3-203ENST00000475482 MYH7P12883 1935 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 TRIM75PA6NK02 468 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 GOLIM4O00461 696 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 BCRP11274 1271 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 JAG1P78504 1218 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 SLC9C2Q5TAH2 1124 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 ARMC5Q96C12 935 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 PARK7Q99497 189 aaKnown RBP18.84■□□□□ 0.61
CPSF3-203ENST00000475482 GINM1Q9NU53 330 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 PDE4DIPQ5VU43 2346 aa18.84■□□□□ 0.61
CPSF3-203ENST00000475482 USP17L5A8MUK1 530 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 GNRH1P01148 92 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 CTGFP29279 349 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 SOX10P56693 466 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 SH3D19Q5HYK7 790 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 ZNF280CQ8ND82 737 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 EDC3Q96F86 508 aaKnown RBP18.83■□□□□ 0.6
CPSF3-203ENST00000475482 DNAJC2Q99543 621 aaKnown RBP18.83■□□□□ 0.6
CPSF3-203ENST00000475482 WDR18Q9BV38 432 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 ARHGAP39Q9C0H5 1083 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 EHD4Q9H223 541 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 BOLA2Q9H3K6 86 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 PAG1Q9NWQ8 432 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 CPA4Q9UI42 421 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 MGAMO43451 1857 aa18.83■□□□□ 0.6
CPSF3-203ENST00000475482 RBBP6Q7Z6E9 1792 aaKnown RBP18.83■□□□□ 0.6
CPSF3-203ENST00000475482 ZNF532Q9HCE3 1301 aa18.82■□□□□ 0.6
CPSF3-203ENST00000475482 SMARCA5O60264 1052 aaPredicted RBP18.82■□□□□ 0.6
CPSF3-203ENST00000475482 ASNSP08243 561 aa18.82■□□□□ 0.6
CPSF3-203ENST00000475482 CYP2C8P10632 490 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms