RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 ATAD5Q96QE3 1844 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 SPDYE5A6NIY4 337 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 TM4SF4P48230 202 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 METTL16Q86W50 562 aaKnown RBP19.56■□□□□ 0.72
SRM-204ENST00000475189 ERO1BQ86YB8 467 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 SDR42E1Q8WUS8 393 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 APPBP2Q92624 585 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 OSBP2Q969R2 916 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 FSD1Q9BTV5 496 aa19.56■□□□□ 0.72
SRM-204ENST00000475189 HERC5Q9UII4 1024 aaKnown RBP19.56■□□□□ 0.72
SRM-204ENST00000475189 MANSC4A6NHS7 340 aaPredicted RBP19.55■□□□□ 0.72
SRM-204ENST00000475189 PRKAB2O43741 272 aa19.55■□□□□ 0.72
SRM-204ENST00000475189 LRRFIP1Q32MZ4 808 aaKnown RBP19.55■□□□□ 0.72
SRM-204ENST00000475189 FOXP4Q8IVH2 680 aaPredicted RBP19.55■□□□□ 0.72
SRM-204ENST00000475189 EVI5LQ96CN4 794 aa19.55■□□□□ 0.72
SRM-204ENST00000475189 OTUD5Q96G74 571 aa19.55■□□□□ 0.72
SRM-204ENST00000475189 PHIPQ8WWQ0 1821 aa19.54■□□□□ 0.72
SRM-204ENST00000475189 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
SRM-204ENST00000475189 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
SRM-204ENST00000475189 PDE4AP27815 886 aa19.54■□□□□ 0.72
SRM-204ENST00000475189 SREBF2Q12772 1141 aa19.54■□□□□ 0.72
SRM-204ENST00000475189 SLC4A8Q2Y0W8 1093 aa19.54■□□□□ 0.72
SRM-204ENST00000475189 DNAJC18Q9H819 358 aa19.54■□□□□ 0.72
SRM-204ENST00000475189 DCP1AQ9NPI6 582 aaPredicted RBP19.54■□□□□ 0.72
SRM-204ENST00000475189 CENPBP07199 599 aaPredicted RBP19.53■□□□□ 0.72
SRM-204ENST00000475189 CTCFP49711 727 aaPredicted RBP19.53■□□□□ 0.72
SRM-204ENST00000475189 INHBEP58166 350 aa19.53■□□□□ 0.72
SRM-204ENST00000475189 PPATQ06203 517 aa19.53■□□□□ 0.72
SRM-204ENST00000475189 RRP1BQ14684 758 aaKnown RBP19.53■□□□□ 0.72
SRM-204ENST00000475189 TTC6Q86TZ1 520 aa19.53■□□□□ 0.72
SRM-204ENST00000475189 SCYL3Q8IZE3 742 aa19.53■□□□□ 0.72
SRM-204ENST00000475189 MS4A4AQ96JQ5 239 aa19.53■□□□□ 0.72
SRM-204ENST00000475189 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
SRM-204ENST00000475189 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
SRM-204ENST00000475189 RNF186Q9NXI6 227 aa19.53■□□□□ 0.72
SRM-204ENST00000475189 CA12O43570 354 aa19.52■□□□□ 0.72
SRM-204ENST00000475189 HSPA8P11142 646 aaKnown RBP19.52■□□□□ 0.72
SRM-204ENST00000475189 PLCD1P51178 756 aa19.52■□□□□ 0.72
SRM-204ENST00000475189 PPIL2Q13356 520 aa19.52■□□□□ 0.72
SRM-204ENST00000475189 ZMYM1Q5SVZ6 1142 aa19.52■□□□□ 0.72
SRM-204ENST00000475189 CRACR2BQ8N4Y2 399 aaPredicted RBP19.52■□□□□ 0.72
SRM-204ENST00000475189 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.72
SRM-204ENST00000475189 SLC4A4Q9Y6R1 1079 aa19.52■□□□□ 0.72
SRM-204ENST00000475189 TESPA1A2RU30 521 aaPredicted RBP19.51■□□□□ 0.71
SRM-204ENST00000475189 M0R2C6 588 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 IRF6O14896 467 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 TRPA1O75762 1119 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 POLR3DP05423 398 aaPredicted RBP19.51■□□□□ 0.71
SRM-204ENST00000475189 PTPRAP18433 802 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 SEC62Q99442 399 aaKnown RBP19.51■□□□□ 0.71
SRM-204ENST00000475189 EHD4Q9H223 541 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 SAGE1Q9NXZ1 904 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 TSKSQ9UJT2 592 aa19.51■□□□□ 0.71
SRM-204ENST00000475189 TRIM6-TRIM34B2RNG4 842 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 GPAA1O43292 621 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 CAP2P40123 477 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 GTF2A2P52657 109 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 EVX2Q03828 476 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 SERPINB13Q9UIV8 391 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 PTPRFP10586 1907 aa19.5■□□□□ 0.71
SRM-204ENST00000475189 MYH8P13535 1937 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 IGF2BP3O00425 579 aaKnown RBP eCLIP19.49■□□□□ 0.714e-6■■■■□ 19.3
SRM-204ENST00000475189 CYP2D6P10635 497 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 LBX1P52954 281 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 TICAM2Q86XR7 235 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 IFNL1Q8IU54 200 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 TNS4Q8IZW8 715 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 BRI3BPQ8WY22 251 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 RILPL2Q969X0 211 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 PTPN18Q99952 460 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.49■□□□□ 0.71
SRM-204ENST00000475189 KCNH4Q9UQ05 1017 aa19.49■□□□□ 0.71
SRM-204ENST00000475189 CASP8AP2Q9UKL3 1982 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 CCL15-CCL14A0A0B4J2E2 113 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 GSG1L2A8MUP6 293 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 JAG1P78504 1218 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 GABPAQ06546 454 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 SNAPC2Q13487 334 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 CCL15Q16663 113 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 TATDN1Q6P1N9 297 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 ZHX2Q9Y6X8 837 aa19.48■□□□□ 0.71
SRM-204ENST00000475189 USP17L12C9JPN9 530 aa19.47■□□□□ 0.71
SRM-204ENST00000475189 USP17L21D6R901 530 aa19.47■□□□□ 0.71
SRM-204ENST00000475189 NEFLP07196 543 aa19.47■□□□□ 0.71
SRM-204ENST00000475189 CETPP11597 493 aa19.47■□□□□ 0.71
SRM-204ENST00000475189 GNAT2P19087 354 aa19.47■□□□□ 0.71
SRM-204ENST00000475189 CENPQQ7L2Z9 268 aaPredicted RBP19.47■□□□□ 0.71
SRM-204ENST00000475189 CCDC84Q86UT8 332 aaPredicted RBP19.47■□□□□ 0.71
SRM-204ENST00000475189 DDRGK1Q96HY6 314 aa19.47■□□□□ 0.71
SRM-204ENST00000475189 AFG3L2Q9Y4W6 797 aa19.47■□□□□ 0.71
SRM-204ENST00000475189 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 CXCL11O14625 94 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 GDF11O95390 407 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 ALDH1A1P00352 501 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 SHMT1P34896 483 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 SHROOM1Q2M3G4 852 aaPredicted RBP19.46■□□□□ 0.71
SRM-204ENST00000475189 C12orf60Q5U649 245 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 GIMAP6Q6P9H5 292 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms