RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 FAM196BA6NMK8 535 aa19.75■□□□□ 0.75
ITGB1-211ENST00000475184 ANP32CO43423 234 aa19.75■□□□□ 0.75
ITGB1-211ENST00000475184 TBC1D12O60347 775 aa19.75■□□□□ 0.75
ITGB1-211ENST00000475184 UBTFL1P0CB47 393 aaPredicted RBP19.75■□□□□ 0.75
ITGB1-211ENST00000475184 IL15P40933 162 aaPredicted RBP19.75■□□□□ 0.75
ITGB1-211ENST00000475184 HMX1Q9NP08 348 aaPredicted RBP19.75■□□□□ 0.75
ITGB1-211ENST00000475184 SPP2Q13103 211 aa19.74■□□□□ 0.75
ITGB1-211ENST00000475184 PABPC4Q13310 644 aaKnown RBP eCLIP19.74■□□□□ 0.75
ITGB1-211ENST00000475184 SPTY2D1Q68D10 685 aaPredicted RBP19.74■□□□□ 0.75
ITGB1-211ENST00000475184 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
ITGB1-211ENST00000475184 ZNF280CQ8ND82 737 aa19.74■□□□□ 0.75
ITGB1-211ENST00000475184 OSBPL5Q9H0X9 879 aaPredicted RBP19.74■□□□□ 0.75
ITGB1-211ENST00000475184 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.74■□□□□ 0.75
ITGB1-211ENST00000475184 GJD2Q9UKL4 321 aa19.74■□□□□ 0.75
ITGB1-211ENST00000475184 COL2A1P02458 1487 aaPredicted RBP19.73■□□□□ 0.75
ITGB1-211ENST00000475184 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
ITGB1-211ENST00000475184 MAGEA10P43363 369 aaPredicted RBP19.73■□□□□ 0.75
ITGB1-211ENST00000475184 HMGCS2P54868 508 aa19.73■□□□□ 0.75
ITGB1-211ENST00000475184 RHBDL3P58872 404 aa19.73■□□□□ 0.75
ITGB1-211ENST00000475184 TRIM32Q13049 653 aa19.73■□□□□ 0.75
ITGB1-211ENST00000475184 LRIT3Q3SXY7 679 aa19.73■□□□□ 0.75
ITGB1-211ENST00000475184 Q7L0L9 218 aa19.73■□□□□ 0.75
ITGB1-211ENST00000475184 TBC1D2Q9BYX2 928 aa19.73■□□□□ 0.75
ITGB1-211ENST00000475184 C11orf49Q9H6J7 331 aa19.73■□□□□ 0.75
ITGB1-211ENST00000475184 PA2G4Q9UQ80 394 aaKnown RBP19.73■□□□□ 0.75
ITGB1-211ENST00000475184 FRMPD3Q5JV73 1810 aa19.72■□□□□ 0.75
ITGB1-211ENST00000475184 GPR75-ASB3A0A0A6YYF3 556 aa19.72■□□□□ 0.75
ITGB1-211ENST00000475184 SYN1P17600 705 aa19.72■□□□□ 0.75
ITGB1-211ENST00000475184 MECOMQ03112 1051 aa19.72■□□□□ 0.75
ITGB1-211ENST00000475184 TDHQ8IZJ6 230 aa19.72■□□□□ 0.75
ITGB1-211ENST00000475184 CDK5RAP2Q96SN8 1893 aa19.72■□□□□ 0.75
ITGB1-211ENST00000475184 ASCC2Q9H1I8 757 aaPredicted RBP19.72■□□□□ 0.75
ITGB1-211ENST00000475184 SIPA1L1O43166 1804 aa19.72■□□□□ 0.75
ITGB1-211ENST00000475184 TRIB2Q92519 343 aa19.71■□□□□ 0.75
ITGB1-211ENST00000475184 OGDHLQ9ULD0 1010 aa19.71■□□□□ 0.75
ITGB1-211ENST00000475184 STXBP5LQ9Y2K9 1186 aa19.71■□□□□ 0.75
ITGB1-211ENST00000475184 TIMM10P62072 90 aa19.7■□□□□ 0.74
ITGB1-211ENST00000475184 ERICH6Q7L0X2 663 aa19.7■□□□□ 0.74
ITGB1-211ENST00000475184 ZNF384Q8TF68 577 aa19.7■□□□□ 0.74
ITGB1-211ENST00000475184 COPRSQ9NQ92 184 aa19.7■□□□□ 0.74
ITGB1-211ENST00000475184 CAP2P40123 477 aa19.69■□□□□ 0.74
ITGB1-211ENST00000475184 MAP3K21Q5TCX8 1036 aa19.69■□□□□ 0.74
ITGB1-211ENST00000475184 UBE2OQ9C0C9 1292 aaKnown RBP19.69■□□□□ 0.74
ITGB1-211ENST00000475184 MTMR10Q9NXD2 777 aa19.69■□□□□ 0.74
ITGB1-211ENST00000475184 MORF4L1Q9UBU8 362 aa19.69■□□□□ 0.74
ITGB1-211ENST00000475184 FOCADQ5VW36 1801 aa19.69■□□□□ 0.74
ITGB1-211ENST00000475184 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 USP17L5A8MUK1 530 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 E9PSI1 815 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 MAP4K4O95819 1239 aaPredicted RBP19.68■□□□□ 0.74
ITGB1-211ENST00000475184 PRKAR2AP13861 404 aaKnown RBP19.68■□□□□ 0.74
ITGB1-211ENST00000475184 RRP1BQ14684 758 aaKnown RBP19.68■□□□□ 0.74
ITGB1-211ENST00000475184 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
ITGB1-211ENST00000475184 ALDH1L2Q3SY69 923 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 SH3D19Q5HYK7 790 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 XAGE2Q96GT9 111 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 SMC4Q9NTJ3 1288 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 PFASO15067 1338 aa19.68■□□□□ 0.74
ITGB1-211ENST00000475184 CYP2B6P20813 491 aa19.67■□□□□ 0.74
ITGB1-211ENST00000475184 IRX3P78415 501 aaPredicted RBP19.67■□□□□ 0.74
ITGB1-211ENST00000475184 AS3MTQ9HBK9 375 aa19.67■□□□□ 0.74
ITGB1-211ENST00000475184 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
ITGB1-211ENST00000475184 VCANP13611 3396 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 EYSQ5T1H1 3165 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 MAST2Q6P0Q8 1798 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 LDHCP07864 332 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 GSTO1P78417 241 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 MTMR2Q13614 643 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 SOCS4Q8WXH5 440 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 NSUN4Q96CB9 384 aaKnown RBP19.66■□□□□ 0.74
ITGB1-211ENST00000475184 NUDT12Q9BQG2 462 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 HERC5Q9UII4 1024 aaKnown RBP19.66■□□□□ 0.74
ITGB1-211ENST00000475184 AKAP2Q9Y2D5 859 aa19.66■□□□□ 0.74
ITGB1-211ENST00000475184 XRCC5P13010 732 aaKnown RBP19.65■□□□□ 0.74
ITGB1-211ENST00000475184 WDR18Q9BV38 432 aa19.65■□□□□ 0.74
ITGB1-211ENST00000475184 MYO5AQ9Y4I1 1855 aaKnown RBP19.65■□□□□ 0.74
ITGB1-211ENST00000475184 PRUNE2Q8WUY3 3088 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 COL6A1P12109 1028 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 HOXA7P31268 230 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-211ENST00000475184 BACE1P56817 501 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 TFCP2Q12800 502 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 PI16Q6UXB8 463 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 TEX11Q8IYF3 940 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 TRMT44Q8IYL2 757 aaKnown RBP19.64■□□□□ 0.73
ITGB1-211ENST00000475184 GPRC5AQ8NFJ5 357 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 TMOD4Q9NZQ9 345 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 HMG20BQ9P0W2 317 aa19.64■□□□□ 0.73
ITGB1-211ENST00000475184 PEX10O60683 326 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 ASNSP08243 561 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 ZKSCAN1P17029 563 aaPredicted RBP19.63■□□□□ 0.73
ITGB1-211ENST00000475184 HERVK_113P62684 666 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 PDE3AQ14432 1141 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 TBC1D9Q6ZT07 1266 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 SPATA5Q8NB90 893 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
ITGB1-211ENST00000475184 MEIS3Q99687 375 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 TXNRD2Q9NNW7 524 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 RAI14Q9P0K7 980 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 PI4KBQ9UBF8 816 aa19.63■□□□□ 0.73
ITGB1-211ENST00000475184 MAPK4P31152 587 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms