RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 HIF3AQ9Y2N7 669 aa6.42□□□□□ -1.38
SDHB-204ENST00000475049 PCDHB14Q9Y5E9 798 aa6.42□□□□□ -1.38
SDHB-204ENST00000475049 SYNGAP1Q96PV0 1343 aa6.42□□□□□ -1.38
SDHB-204ENST00000475049 GFRA2O00451 464 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 PLCG1P19174 1290 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 NOS3P29474 1203 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 GTF2F1P35269 517 aaKnown RBP eCLIP6.41□□□□□ -1.38
SDHB-204ENST00000475049 USP11P51784 963 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 ERVK-24P63145 666 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 PDE4BQ07343 736 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 MLECQ14165 292 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 MBTPS1Q14703 1052 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 CCDC81Q6ZN84 652 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 Q8N3U1 123 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 CRBNQ96SW2 442 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 CRIM1Q9NZV1 1036 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 PCDHGC5Q9Y5F6 944 aa6.41□□□□□ -1.38
SDHB-204ENST00000475049 PGRP06401 933 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 HCLS1P14317 486 aaPredicted RBP6.4□□□□□ -1.38
SDHB-204ENST00000475049 RAB6AP20340 208 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 GRK4P32298 578 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 PREPP48147 710 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 SOX9P48436 509 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 CLCQ05315 142 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 CDC37L1Q7L3B6 337 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 CYFIP1Q7L576 1253 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 MCF2L2Q86YR7 1114 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 ANAPC16Q96DE5 110 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 GMLQ99445 158 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
SDHB-204ENST00000475049 DISC1Q9NRI5 854 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.38
SDHB-204ENST00000475049 CORINQ9Y5Q5 1042 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 ACTL7BQ9Y614 415 aa6.4□□□□□ -1.38
SDHB-204ENST00000475049 FANCGO15287 622 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 HTR3BO95264 441 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 TIAF1O95411 115 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 RXRBP28702 533 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 TTLL4Q14679 1199 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 TXNRD3Q86VQ6 643 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 REXO1Q8N1G1 1221 aaKnown RBP6.39□□□□□ -1.39
SDHB-204ENST00000475049 C2CD4AQ8NCU7 369 aaPredicted RBP6.39□□□□□ -1.39
SDHB-204ENST00000475049 RNF214Q8ND24 703 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 DHX38Q92620 1227 aaKnown RBP6.39□□□□□ -1.39
SDHB-204ENST00000475049 WNT10AQ9GZT5 417 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 STRIP2Q9ULQ0 834 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 MRVI1Q9Y6F6 885 aa6.39□□□□□ -1.39
SDHB-204ENST00000475049 DYRK3O43781 588 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 STK10O94804 968 aaKnown RBP6.38□□□□□ -1.39
SDHB-204ENST00000475049 FGRP09769 529 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 EIF6P56537 245 aaKnown RBP6.38□□□□□ -1.39
SDHB-204ENST00000475049 ZBTB37Q5TC79 503 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 ZNF507Q8TCN5 953 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 UTP4Q969X6 686 aaKnown RBP6.38□□□□□ -1.39
SDHB-204ENST00000475049 YIPF2Q9BWQ6 316 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 FAM105AQ9NUU6 356 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 REV1Q9UBZ9 1251 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 KLHL3Q9UH77 587 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 TACC3Q9Y6A5 838 aa6.38□□□□□ -1.39
SDHB-204ENST00000475049 IMPDH2P12268 514 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 Q6ZS46 218 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 SMYD4Q8IYR2 804 aaPredicted RBP6.37□□□□□ -1.39
SDHB-204ENST00000475049 UBXN4Q92575 508 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 ISL2Q96A47 359 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 MEGF10Q96KG7 1140 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 UBL7Q96S82 380 aaPredicted RBP6.37□□□□□ -1.39
SDHB-204ENST00000475049 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
SDHB-204ENST00000475049 KCNF1Q9H3M0 494 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 EHMT1Q9H9B1 1298 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 ZNRF3Q9ULT6 936 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 DAGLAQ9Y4D2 1042 aa6.37□□□□□ -1.39
SDHB-204ENST00000475049 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.36□□□□□ -1.39
SDHB-204ENST00000475049 IGSF3O75054 1194 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 ATE1O95260 518 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 NEFMP07197 916 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 H2AFB1P0C5Y9 115 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 H2AFB2P0C5Z0 115 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 BMP3P12645 472 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 RING1Q06587 406 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 LRRFIP1Q32MZ4 808 aaKnown RBP6.36□□□□□ -1.39
SDHB-204ENST00000475049 ZMYM1Q5SVZ6 1142 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 HID1Q8IV36 788 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.36□□□□□ -1.39
SDHB-204ENST00000475049 KCT2Q8NC54 265 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 FBLIM1Q8WUP2 373 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 FAM46AQ96IP4 442 aaKnown RBP6.36□□□□□ -1.39
SDHB-204ENST00000475049 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
SDHB-204ENST00000475049 R3HCC1Q9Y3T6 440 aaKnown RBP6.36□□□□□ -1.39
SDHB-204ENST00000475049 PRR36Q9H6K5 1346 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 UVSSAQ2YD98 709 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 SGO2Q562F6 1265 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 CDPF1Q6NVV7 123 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.35□□□□□ -1.39
SDHB-204ENST00000475049 FAM13CQ8NE31 585 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 DNAJC2Q99543 621 aaKnown RBP6.35□□□□□ -1.39
SDHB-204ENST00000475049 ANTXR1Q9H6X2 564 aa6.35□□□□□ -1.39
SDHB-204ENST00000475049 ZNF408Q9H9D4 720 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms