RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.73■□□□□ 0.75
ITGB5-205ENST00000474838 CPA4Q9UI42 421 aa19.73■□□□□ 0.75
ITGB5-205ENST00000474838 SLC45A1Q9Y2W3 748 aa19.73■□□□□ 0.75
ITGB5-205ENST00000474838 PTCH2Q9Y6C5 1203 aa19.73■□□□□ 0.75
ITGB5-205ENST00000474838 ZSWIM8A7E2V4 1837 aa19.73■□□□□ 0.75
ITGB5-205ENST00000474838 MYO5AQ9Y4I1 1855 aaKnown RBP19.73■□□□□ 0.75
ITGB5-205ENST00000474838 PTPRFP10586 1907 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 SIPA1L1O43166 1804 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 TRIM75PA6NK02 468 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 CYP7A1P22680 504 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 CERS3Q8IU89 383 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 MAPKAPK5Q8IW41 473 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 SIRT2Q8IXJ6 389 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 TGFBRAP1Q8WUH2 860 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 CDK5RAP2Q96SN8 1893 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 PI4KBQ9UBF8 816 aa19.72■□□□□ 0.75
ITGB5-205ENST00000474838 RBBP6Q7Z6E9 1792 aaKnown RBP19.72■□□□□ 0.75
ITGB5-205ENST00000474838 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
ITGB5-205ENST00000474838 CCDC84Q86UT8 332 aaPredicted RBP19.71■□□□□ 0.75
ITGB5-205ENST00000474838 CLASRPQ8N2M8 674 aaKnown RBP19.71■□□□□ 0.75
ITGB5-205ENST00000474838 TBC1D2Q9BYX2 928 aa19.71■□□□□ 0.75
ITGB5-205ENST00000474838 NDUFB9Q9Y6M9 179 aa19.71■□□□□ 0.75
ITGB5-205ENST00000474838 TNRC18O15417 2968 aaPredicted RBP19.71■□□□□ 0.75
ITGB5-205ENST00000474838 ATAD5Q96QE3 1844 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 CYP2C8P10632 490 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 CAP2P40123 477 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 PRMT2P55345 433 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 MAP3K12Q12852 859 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 PDE3AQ14432 1141 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 SLC9C1Q4G0N8 1177 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 MAGEB6Q8N7X4 407 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
ITGB5-205ENST00000474838 APBB1O00213 710 aa19.69■□□□□ 0.74
ITGB5-205ENST00000474838 RAB11FIP3O75154 756 aa19.69■□□□□ 0.74
ITGB5-205ENST00000474838 BCRP11274 1271 aa19.69■□□□□ 0.74
ITGB5-205ENST00000474838 DYNLL1P63167 89 aaKnown RBP19.69■□□□□ 0.74
ITGB5-205ENST00000474838 METTL16Q86W50 562 aaKnown RBP19.69■□□□□ 0.74
ITGB5-205ENST00000474838 ZNF333Q96JL9 665 aa19.69■□□□□ 0.74
ITGB5-205ENST00000474838 AGTPBP1Q9UPW5 1226 aa19.69■□□□□ 0.74
ITGB5-205ENST00000474838 LOC285556D6RIA3 1793 aa19.69■□□□□ 0.74
ITGB5-205ENST00000474838 HLA-DOAP06340 250 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 IFIT2P09913 472 aaKnown RBP19.68■□□□□ 0.74
ITGB5-205ENST00000474838 PSMC4P43686 418 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 RRP1BQ14684 758 aaKnown RBP19.68■□□□□ 0.74
ITGB5-205ENST00000474838 TTF1Q15361 905 aaPredicted RBP19.68■□□□□ 0.74
ITGB5-205ENST00000474838 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 NBPF11Q86T75 865 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 MIGA1Q8NAN2 632 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 PROCA1Q8NCQ7 364 aaPredicted RBP19.68■□□□□ 0.74
ITGB5-205ENST00000474838 ZNF280CQ8ND82 737 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.68■□□□□ 0.74
ITGB5-205ENST00000474838 TRIM47Q96LD4 638 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 DNAJC18Q9H819 358 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 PALD1Q9ULE6 856 aa19.68■□□□□ 0.74
ITGB5-205ENST00000474838 POTEFA5A3E0 1075 aa19.67■□□□□ 0.74
ITGB5-205ENST00000474838 USP17L5A8MUK1 530 aa19.67■□□□□ 0.74
ITGB5-205ENST00000474838 CTGFP29279 349 aa19.67■□□□□ 0.74
ITGB5-205ENST00000474838 FOXP4Q8IVH2 680 aaPredicted RBP19.67■□□□□ 0.74
ITGB5-205ENST00000474838 CRACR2BQ8N4Y2 399 aaPredicted RBP19.67■□□□□ 0.74
ITGB5-205ENST00000474838 TRIM34Q9BYJ4 488 aa19.67■□□□□ 0.74
ITGB5-205ENST00000474838 AS3MTQ9HBK9 375 aa19.67■□□□□ 0.74
ITGB5-205ENST00000474838 ASNSP08243 561 aa19.66■□□□□ 0.74
ITGB5-205ENST00000474838 SPP2Q13103 211 aa19.66■□□□□ 0.74
ITGB5-205ENST00000474838 SMCR8Q8TEV9 937 aaPredicted RBP19.66■□□□□ 0.74
ITGB5-205ENST00000474838 SRRDQ9UH36 339 aa19.66■□□□□ 0.74
ITGB5-205ENST00000474838 SAP30BPQ9UHR5 308 aaKnown RBP19.66■□□□□ 0.74
ITGB5-205ENST00000474838 PNMA3Q9UL41 463 aa19.66■□□□□ 0.74
ITGB5-205ENST00000474838 ECM2O94769 699 aaPredicted RBP19.65■□□□□ 0.74
ITGB5-205ENST00000474838 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
ITGB5-205ENST00000474838 OSBPP22059 807 aa19.65■□□□□ 0.74
ITGB5-205ENST00000474838 HOXD10P28358 340 aa19.65■□□□□ 0.74
ITGB5-205ENST00000474838 USP5P45974 858 aa19.65■□□□□ 0.74
ITGB5-205ENST00000474838 TREML2Q5T2D2 321 aa19.65■□□□□ 0.74
ITGB5-205ENST00000474838 GINM1Q9NU53 330 aa19.65■□□□□ 0.74
ITGB5-205ENST00000474838 DDX60LQ5H9U9 1706 aaKnown RBP19.65■□□□□ 0.74
ITGB5-205ENST00000474838 HMGCS2P54868 508 aa19.64■□□□□ 0.73
ITGB5-205ENST00000474838 FCGRTP55899 365 aa19.64■□□□□ 0.73
ITGB5-205ENST00000474838 SH3D19Q5HYK7 790 aa19.64■□□□□ 0.73
ITGB5-205ENST00000474838 DNAJC2Q99543 621 aaKnown RBP19.64■□□□□ 0.73
ITGB5-205ENST00000474838 RIOK1Q9BRS2 568 aaKnown RBP19.64■□□□□ 0.73
ITGB5-205ENST00000474838 WDR18Q9BV38 432 aa19.64■□□□□ 0.73
ITGB5-205ENST00000474838 TMEM106CQ9BVX2 250 aa19.64■□□□□ 0.73
ITGB5-205ENST00000474838 MYPNQ86TC9 1320 aa19.64■□□□□ 0.73
ITGB5-205ENST00000474838 PDE4DIPQ5VU43 2346 aa19.64■□□□□ 0.73
ITGB5-205ENST00000474838 GOLIM4O00461 696 aa19.63■□□□□ 0.73
ITGB5-205ENST00000474838 PDE6AP16499 860 aa19.63■□□□□ 0.73
ITGB5-205ENST00000474838 PABPC4Q13310 644 aaKnown RBP eCLIP19.63■□□□□ 0.73
ITGB5-205ENST00000474838 SH3TC2Q8TF17 1288 aa19.63■□□□□ 0.73
ITGB5-205ENST00000474838 EHD4Q9H223 541 aa19.63■□□□□ 0.73
ITGB5-205ENST00000474838 GDF11O95390 407 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 JAG1P78504 1218 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 MTMR2Q13614 643 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 SLC4A8Q2Y0W8 1093 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 SLC9C2Q5TAH2 1124 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 RAET1EQ8TD07 263 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 ZBTB21Q9ULJ3 1066 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 MYH1P12882 1939 aa19.62■□□□□ 0.73
ITGB5-205ENST00000474838 CENPFP49454 3210 aa19.61■□□□□ 0.73
ITGB5-205ENST00000474838 MAGEB6P1A0A0J9YX57 407 aa19.61■□□□□ 0.73
ITGB5-205ENST00000474838 PRKCZQ05513 592 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms