RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DHX36Q9H2U1 1008 aaKnown RBP18.42■□□□□ 0.54
VARS-223ENST00000474643 BIN2Q9UBW5 565 aaPredicted RBP18.42■□□□□ 0.54
VARS-223ENST00000474643 DBNLQ9UJU6 430 aaKnown RBP18.42■□□□□ 0.54
VARS-223ENST00000474643 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
VARS-223ENST00000474643 CENPFP49454 3210 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 TBC1D12O60347 775 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 CYP2E1P05181 493 aaPredicted RBP18.41■□□□□ 0.54
VARS-223ENST00000474643 FCGRTP55899 365 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
VARS-223ENST00000474643 MAPKAPK5Q8IW41 473 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 SH3TC2Q8TF17 1288 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 ZNF333Q96JL9 665 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 ZNF512BQ96KM6 892 aaPredicted RBP18.41■□□□□ 0.54
VARS-223ENST00000474643 AS3MTQ9HBK9 375 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 PI4KBQ9UBF8 816 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 HERC5Q9UII4 1024 aaKnown RBP18.41■□□□□ 0.54
VARS-223ENST00000474643 AFG3L2Q9Y4W6 797 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 PDE4DIPQ5VU43 2346 aa18.41■□□□□ 0.54
VARS-223ENST00000474643 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
VARS-223ENST00000474643 HLA-DOAP06340 250 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 SLURP2P0DP57 97 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 CYP7A1P22680 504 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 PABPC4Q13310 644 aaKnown RBP eCLIP18.4■□□□□ 0.54
VARS-223ENST00000474643 CERS3Q8IU89 383 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 TBC1D2Q9BYX2 928 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 TLR7Q9NYK1 1049 aaKnown RBP18.4■□□□□ 0.54
VARS-223ENST00000474643 MYPNQ86TC9 1320 aa18.4■□□□□ 0.54
VARS-223ENST00000474643 IGSF3O75054 1194 aa18.39■□□□□ 0.53
VARS-223ENST00000474643 USP5P45974 858 aa18.39■□□□□ 0.53
VARS-223ENST00000474643 CAP1Q01518 475 aa18.39■□□□□ 0.53
VARS-223ENST00000474643 MAP3K12Q12852 859 aa18.39■□□□□ 0.53
VARS-223ENST00000474643 CCDC84Q86UT8 332 aaPredicted RBP18.39■□□□□ 0.53
VARS-223ENST00000474643 ZNF280CQ8ND82 737 aa18.39■□□□□ 0.53
VARS-223ENST00000474643 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
VARS-223ENST00000474643 TRIM47Q96LD4 638 aa18.39■□□□□ 0.53
VARS-223ENST00000474643 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.39■□□□□ 0.53
VARS-223ENST00000474643 SRRDQ9UH36 339 aa18.39■□□□□ 0.53
VARS-223ENST00000474643 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
VARS-223ENST00000474643 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 SPP2Q13103 211 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 MOGSQ13724 837 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 GPAT2Q6NUI2 795 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 SIRT2Q8IXJ6 389 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 CLASRPQ8N2M8 674 aaKnown RBP18.38■□□□□ 0.53
VARS-223ENST00000474643 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 PIH1D3Q9NQM4 214 aaKnown RBP18.38■□□□□ 0.53
VARS-223ENST00000474643 SAP30BPQ9UHR5 308 aaKnown RBP18.38■□□□□ 0.53
VARS-223ENST00000474643 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 AGTPBP1Q9UPW5 1226 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 SLC45A1Q9Y2W3 748 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 FLT1P17948 1338 aa18.38■□□□□ 0.53
VARS-223ENST00000474643 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
VARS-223ENST00000474643 EN2P19622 333 aaPredicted RBP18.37■□□□□ 0.53
VARS-223ENST00000474643 OSBPP22059 807 aa18.37■□□□□ 0.53
VARS-223ENST00000474643 CAP2P40123 477 aa18.37■□□□□ 0.53
VARS-223ENST00000474643 MAGEB6Q8N7X4 407 aa18.37■□□□□ 0.53
VARS-223ENST00000474643 MIGA1Q8NAN2 632 aa18.37■□□□□ 0.53
VARS-223ENST00000474643 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
VARS-223ENST00000474643 TNPO2O14787 897 aaKnown RBP18.36■□□□□ 0.53
VARS-223ENST00000474643 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 ASNSP08243 561 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 GRK4P32298 578 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 PPP4CP60510 307 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 UBXN2AP68543 259 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 PROCA1Q8NCQ7 364 aaPredicted RBP18.36■□□□□ 0.53
VARS-223ENST00000474643 RHPN1Q8TCX5 695 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 TMOD4Q9NZQ9 345 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 PALD1Q9ULE6 856 aa18.36■□□□□ 0.53
VARS-223ENST00000474643 ZSWIM8A7E2V4 1837 aa18.35■□□□□ 0.53
VARS-223ENST00000474643 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
VARS-223ENST00000474643 HMGCS2P54868 508 aa18.35■□□□□ 0.53
VARS-223ENST00000474643 DYNLL1P63167 89 aaKnown RBP18.35■□□□□ 0.53
VARS-223ENST00000474643 TTF1Q15361 905 aaPredicted RBP18.35■□□□□ 0.53
VARS-223ENST00000474643 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
VARS-223ENST00000474643 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
VARS-223ENST00000474643 BCRP11274 1271 aa18.34■□□□□ 0.53
VARS-223ENST00000474643 IRX3P78415 501 aaPredicted RBP18.34■□□□□ 0.53
VARS-223ENST00000474643 TREML2Q5T2D2 321 aa18.34■□□□□ 0.53
VARS-223ENST00000474643 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
VARS-223ENST00000474643 ANKRD13CQ8N6S4 541 aa18.34■□□□□ 0.53
VARS-223ENST00000474643 COA7Q96BR5 231 aa18.34■□□□□ 0.53
VARS-223ENST00000474643 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
VARS-223ENST00000474643 GDF11O95390 407 aa18.33■□□□□ 0.52
VARS-223ENST00000474643 PRKCZQ05513 592 aa18.33■□□□□ 0.52
VARS-223ENST00000474643 MTMR2Q13614 643 aa18.33■□□□□ 0.52
VARS-223ENST00000474643 TMED8Q6PL24 325 aaPredicted RBP18.33■□□□□ 0.52
VARS-223ENST00000474643 SLAIN1Q8ND83 568 aa18.33■□□□□ 0.52
VARS-223ENST00000474643 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
VARS-223ENST00000474643 BRCA2P51587 3418 aa18.32■□□□□ 0.52
VARS-223ENST00000474643 GCLCP48506 637 aaPredicted RBP18.32■□□□□ 0.52
VARS-223ENST00000474643 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
VARS-223ENST00000474643 FEZ1Q99689 392 aa18.32■□□□□ 0.52
VARS-223ENST00000474643 ATAD5Q96QE3 1844 aa18.32■□□□□ 0.52
VARS-223ENST00000474643 CTGFP29279 349 aa18.31■□□□□ 0.52
VARS-223ENST00000474643 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
VARS-223ENST00000474643 CCAR1Q8IX12 1150 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms