RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 DZIP1Q86YF9 867 aaKnown RBP16.54■□□□□ 0.24
RTN4R-206ENST00000474642 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
RTN4R-206ENST00000474642 TRMT44Q8IYL2 757 aaKnown RBP16.54■□□□□ 0.24
RTN4R-206ENST00000474642 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
RTN4R-206ENST00000474642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.54■□□□□ 0.24
RTN4R-206ENST00000474642 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
RTN4R-206ENST00000474642 GAKO14976 1311 aa16.53■□□□□ 0.24
RTN4R-206ENST00000474642 TTC28Q96AY4 2481 aa16.53■□□□□ 0.24
RTN4R-206ENST00000474642 TBC1D12O60347 775 aa16.53■□□□□ 0.24
RTN4R-206ENST00000474642 XRCC5P13010 732 aaKnown RBP16.53■□□□□ 0.24
RTN4R-206ENST00000474642 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
RTN4R-206ENST00000474642 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
RTN4R-206ENST00000474642 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
RTN4R-206ENST00000474642 MAFAQ8NHW3 353 aaPredicted RBP16.53■□□□□ 0.24
RTN4R-206ENST00000474642 SOCS4Q8WXH5 440 aa16.53■□□□□ 0.24
RTN4R-206ENST00000474642 TBC1D2Q9BYX2 928 aa16.53■□□□□ 0.24
RTN4R-206ENST00000474642 OSBPL5Q9H0X9 879 aaPredicted RBP16.53■□□□□ 0.24
RTN4R-206ENST00000474642 MORF4L1Q9UBU8 362 aa16.53■□□□□ 0.24
RTN4R-206ENST00000474642 VCANP13611 3396 aa16.52■□□□□ 0.24
RTN4R-206ENST00000474642 PLXNB2O15031 1838 aa16.52■□□□□ 0.24
RTN4R-206ENST00000474642 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
RTN4R-206ENST00000474642 SEMA3EO15041 775 aa16.52■□□□□ 0.24
RTN4R-206ENST00000474642 BTDP43251 543 aa16.52■□□□□ 0.24
RTN4R-206ENST00000474642 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
RTN4R-206ENST00000474642 PDE3AQ14432 1141 aa16.52■□□□□ 0.24
RTN4R-206ENST00000474642 CDX2Q99626 313 aaPredicted RBP16.52■□□□□ 0.24
RTN4R-206ENST00000474642 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
RTN4R-206ENST00000474642 COL2A1P02458 1487 aaPredicted RBP16.51■□□□□ 0.23
RTN4R-206ENST00000474642 USP17L5A8MUK1 530 aa16.51■□□□□ 0.23
RTN4R-206ENST00000474642 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
RTN4R-206ENST00000474642 PHKA1P46020 1223 aa16.51■□□□□ 0.23
RTN4R-206ENST00000474642 CCAR1Q8IX12 1150 aaKnown RBP16.51■□□□□ 0.23
RTN4R-206ENST00000474642 SENP6Q9GZR1 1112 aaPredicted RBP16.51■□□□□ 0.23
RTN4R-206ENST00000474642 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
RTN4R-206ENST00000474642 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
RTN4R-206ENST00000474642 PRKAG2Q9UGJ0 569 aa16.51■□□□□ 0.23
RTN4R-206ENST00000474642 LOC285556D6RIA3 1793 aa16.51■□□□□ 0.23
RTN4R-206ENST00000474642 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
RTN4R-206ENST00000474642 CCDC184Q52MB2 194 aa16.5■□□□□ 0.23
RTN4R-206ENST00000474642 SH3D19Q5HYK7 790 aa16.5■□□□□ 0.23
RTN4R-206ENST00000474642 LHX8Q68G74 356 aa16.5■□□□□ 0.23
RTN4R-206ENST00000474642 ATG9AQ7Z3C6 839 aa16.5■□□□□ 0.23
RTN4R-206ENST00000474642 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
RTN4R-206ENST00000474642 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
RTN4R-206ENST00000474642 SIL1Q9H173 461 aa16.5■□□□□ 0.23
RTN4R-206ENST00000474642 AS3MTQ9HBK9 375 aa16.5■□□□□ 0.23
RTN4R-206ENST00000474642 MAPK4P31152 587 aa16.49■□□□□ 0.23
RTN4R-206ENST00000474642 CAP2P40123 477 aa16.49■□□□□ 0.23
RTN4R-206ENST00000474642 RGS2P41220 211 aa16.49■□□□□ 0.23
RTN4R-206ENST00000474642 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
RTN4R-206ENST00000474642 SPTY2D1Q68D10 685 aaPredicted RBP16.49■□□□□ 0.23
RTN4R-206ENST00000474642 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
RTN4R-206ENST00000474642 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
RTN4R-206ENST00000474642 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
RTN4R-206ENST00000474642 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
RTN4R-206ENST00000474642 PEX10O60683 326 aa16.48■□□□□ 0.23
RTN4R-206ENST00000474642 CCL14Q16627 93 aa16.48■□□□□ 0.23
RTN4R-206ENST00000474642 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
RTN4R-206ENST00000474642 TXNRD2Q9NNW7 524 aa16.48■□□□□ 0.23
RTN4R-206ENST00000474642 LAMA2P24043 3122 aaKnown RBP16.48■□□□□ 0.23
RTN4R-206ENST00000474642 MROH7-TTC4A0A0A0MT08 1334 aa16.47■□□□□ 0.23
RTN4R-206ENST00000474642 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
RTN4R-206ENST00000474642 ATN1P54259 1190 aaPredicted RBP16.47■□□□□ 0.23
RTN4R-206ENST00000474642 HERVK_113P62684 666 aa16.47■□□□□ 0.23
RTN4R-206ENST00000474642 MTMR2Q13614 643 aa16.47■□□□□ 0.23
RTN4R-206ENST00000474642 CCDC102BQ68D86 513 aa16.47■□□□□ 0.23
RTN4R-206ENST00000474642 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
RTN4R-206ENST00000474642 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
RTN4R-206ENST00000474642 GPR75-ASB3A0A0A6YYF3 556 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
RTN4R-206ENST00000474642 RHBDL3P58872 404 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 ERICH6Q7L0X2 663 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 GPR142Q7Z601 462 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 MYLIPQ8WY64 445 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 USP6NLQ92738 828 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 APBA2Q99767 749 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
RTN4R-206ENST00000474642 CIAO1O76071 339 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 COL9A1P20849 921 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 ADORA1P30542 326 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 BACE1P56817 501 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 ERVK-9P63128 1117 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 ERVK-24P63145 666 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 RASGRF1Q13972 1273 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 RRP1BQ14684 758 aaKnown RBP16.45■□□□□ 0.22
RTN4R-206ENST00000474642 SHHQ15465 462 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 Q3C1V9 767 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 MORN1Q5T089 497 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 MFSD14CQ5VZR4 134 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 PORCNQ9H237 461 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 RBPJLQ9UBG7 517 aa16.45■□□□□ 0.22
RTN4R-206ENST00000474642 PRUNE2Q8WUY3 3088 aa16.44■□□□□ 0.22
RTN4R-206ENST00000474642 FOSL2P15408 326 aa16.44■□□□□ 0.22
RTN4R-206ENST00000474642 RTP1P59025 263 aa16.44■□□□□ 0.22
RTN4R-206ENST00000474642 MECOMQ03112 1051 aa16.44■□□□□ 0.22
RTN4R-206ENST00000474642 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
RTN4R-206ENST00000474642 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
RTN4R-206ENST00000474642 HERC5Q9UII4 1024 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms