RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 MCOLN1Q9GZU1 580 aa19.38■□□□□ 0.69
ITGB1-210ENST00000474568 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-210ENST00000474568 ZHX2Q9Y6X8 837 aa19.38■□□□□ 0.69
ITGB1-210ENST00000474568 BTBD19C9JJ37 291 aa19.37■□□□□ 0.69
ITGB1-210ENST00000474568 TBC1D12O60347 775 aa19.37■□□□□ 0.69
ITGB1-210ENST00000474568 PTPRAP18433 802 aa19.37■□□□□ 0.69
ITGB1-210ENST00000474568 ADD2P35612 726 aa19.37■□□□□ 0.69
ITGB1-210ENST00000474568 RRP1BQ14684 758 aaKnown RBP19.37■□□□□ 0.69
ITGB1-210ENST00000474568 LCORLQ8N3X6 602 aa19.37■□□□□ 0.69
ITGB1-210ENST00000474568 CRACR2BQ8N4Y2 399 aaPredicted RBP19.37■□□□□ 0.69
ITGB1-210ENST00000474568 DHX36Q9H2U1 1008 aaKnown RBP19.37■□□□□ 0.69
ITGB1-210ENST00000474568 ARMT1Q9H993 441 aa19.37■□□□□ 0.69
ITGB1-210ENST00000474568 PI4KBQ9UBF8 816 aa19.37■□□□□ 0.69
ITGB1-210ENST00000474568 CTNND1O60716 968 aaKnown RBP19.36■□□□□ 0.69
ITGB1-210ENST00000474568 HLA-DOAP06340 250 aa19.36■□□□□ 0.69
ITGB1-210ENST00000474568 HDAC1Q13547 482 aaPredicted RBP19.36■□□□□ 0.69
ITGB1-210ENST00000474568 TAF1CQ15572 869 aaPredicted RBP19.36■□□□□ 0.69
ITGB1-210ENST00000474568 CERS3Q8IU89 383 aa19.36■□□□□ 0.69
ITGB1-210ENST00000474568 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.36■□□□□ 0.69
ITGB1-210ENST00000474568 FKTNO75072 461 aa19.35■□□□□ 0.69
ITGB1-210ENST00000474568 MBD4O95243 580 aa19.35■□□□□ 0.69
ITGB1-210ENST00000474568 TMED8Q6PL24 325 aaPredicted RBP19.35■□□□□ 0.69
ITGB1-210ENST00000474568 SDR42E1Q8WUS8 393 aa19.35■□□□□ 0.69
ITGB1-210ENST00000474568 ABHD8Q96I13 439 aa19.35■□□□□ 0.69
ITGB1-210ENST00000474568 CFHR5Q9BXR6 569 aa19.35■□□□□ 0.69
ITGB1-210ENST00000474568 CRNKL1Q9BZJ0 848 aaKnown RBP19.35■□□□□ 0.69
ITGB1-210ENST00000474568 DNAJC18Q9H819 358 aa19.35■□□□□ 0.69
ITGB1-210ENST00000474568 HERC5Q9UII4 1024 aaKnown RBP19.35■□□□□ 0.69
ITGB1-210ENST00000474568 KCNH4Q9UQ05 1017 aa19.35■□□□□ 0.69
ITGB1-210ENST00000474568 TRIM75PA6NK02 468 aa19.34■□□□□ 0.69
ITGB1-210ENST00000474568 PRKAB2O43741 272 aa19.34■□□□□ 0.69
ITGB1-210ENST00000474568 GDF11O95390 407 aa19.34■□□□□ 0.69
ITGB1-210ENST00000474568 SHROOM1Q2M3G4 852 aaPredicted RBP19.34■□□□□ 0.69
ITGB1-210ENST00000474568 GCC1Q96CN9 775 aa19.34■□□□□ 0.69
ITGB1-210ENST00000474568 CAP2P40123 477 aa19.33■□□□□ 0.68
ITGB1-210ENST00000474568 B4GALNT3Q6L9W6 998 aa19.33■□□□□ 0.68
ITGB1-210ENST00000474568 ZSCAN25Q6NSZ9 544 aa19.33■□□□□ 0.68
ITGB1-210ENST00000474568 GADL1Q6ZQY3 521 aa19.33■□□□□ 0.68
ITGB1-210ENST00000474568 CTU1Q7Z7A3 348 aaKnown RBP19.33■□□□□ 0.68
ITGB1-210ENST00000474568 FOXP4Q8IVH2 680 aaPredicted RBP19.33■□□□□ 0.68
ITGB1-210ENST00000474568 ZFYVE28Q9HCC9 887 aa19.33■□□□□ 0.68
ITGB1-210ENST00000474568 AFG3L2Q9Y4W6 797 aa19.33■□□□□ 0.68
ITGB1-210ENST00000474568 CXCL11O14625 94 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 IGHDP01880 384 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 POLR3DP05423 398 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-210ENST00000474568 MX1P20591 662 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 JAG1P78504 1218 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 EVX2Q03828 476 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 AAMPQ13685 434 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 MOGSQ13724 837 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 UBE3CQ15386 1083 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 PI4K2BQ8TCG2 481 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-210ENST00000474568 MCM9Q9NXL9 1143 aa19.32■□□□□ 0.68
ITGB1-210ENST00000474568 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 PDHXO00330 501 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 ERC2O15083 957 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 ECM2O94769 699 aaPredicted RBP19.31■□□□□ 0.68
ITGB1-210ENST00000474568 CYP2D6P10635 497 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 PLCD1P51178 756 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 KBTBD3Q8NAB2 608 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 CD99L2Q8TCZ2 262 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 LNPKQ9C0E8 428 aa19.31■□□□□ 0.68
ITGB1-210ENST00000474568 PUS7LQ9H0K6 701 aaKnown RBP19.31■□□□□ 0.68
ITGB1-210ENST00000474568 A0A0G2JLL6 359 aaPredicted RBP19.3■□□□□ 0.68
ITGB1-210ENST00000474568 GLRX3O76003 335 aaKnown RBP19.3■□□□□ 0.68
ITGB1-210ENST00000474568 SPP2Q13103 211 aa19.3■□□□□ 0.68
ITGB1-210ENST00000474568 NOM1Q5C9Z4 860 aaKnown RBP19.3■□□□□ 0.68
ITGB1-210ENST00000474568 PRRT2Q7Z6L0 340 aaPredicted RBP19.3■□□□□ 0.68
ITGB1-210ENST00000474568 ANKRD23Q86SG2 305 aa19.3■□□□□ 0.68
ITGB1-210ENST00000474568 TTC6Q86TZ1 520 aa19.3■□□□□ 0.68
ITGB1-210ENST00000474568 DCP1AQ9NPI6 582 aaPredicted RBP19.3■□□□□ 0.68
ITGB1-210ENST00000474568 CCDC85CA6NKD9 419 aa19.29■□□□□ 0.68
ITGB1-210ENST00000474568 USP17L5A8MUK1 530 aa19.29■□□□□ 0.68
ITGB1-210ENST00000474568 GPAT2Q6NUI2 795 aa19.29■□□□□ 0.68
ITGB1-210ENST00000474568 METTL16Q86W50 562 aaKnown RBP19.29■□□□□ 0.68
ITGB1-210ENST00000474568 SERPINB13Q9UIV8 391 aa19.29■□□□□ 0.68
ITGB1-210ENST00000474568 SLC4A4Q9Y6R1 1079 aa19.29■□□□□ 0.68
ITGB1-210ENST00000474568 SIPA1L1O43166 1804 aa19.29■□□□□ 0.68
ITGB1-210ENST00000474568 SALL3Q9BXA9 1300 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 RNF113AO15541 343 aaKnown RBP19.28■□□□□ 0.68
ITGB1-210ENST00000474568 SP3Q02447 781 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 ZNF280CQ8ND82 737 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 FSD1Q9BTV5 496 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 CPA4Q9UI42 421 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 ZBTB21Q9ULJ3 1066 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 TRIM17Q9Y577 477 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 DOCK1Q14185 1865 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 CDK5RAP2Q96SN8 1893 aa19.28■□□□□ 0.68
ITGB1-210ENST00000474568 LAMB1P07942 1786 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 CYP2D7A0A087X1C5 515 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 GH2P01242 217 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 CYP2C8P10632 490 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.68
ITGB1-210ENST00000474568 OSBP2Q969R2 916 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 ERO1AQ96HE7 468 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 EHD4Q9H223 541 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 ZCCHC17Q9NP64 241 aaKnown RBP19.27■□□□□ 0.68
ITGB1-210ENST00000474568 FOCADQ5VW36 1801 aa19.27■□□□□ 0.68
ITGB1-210ENST00000474568 SMIM22K7EJ46 135 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms