RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 EXOC6BQ9Y2D4 811 aa24.87■■□□□ 1.57
PDLIM4-206ENST00000474421 SLURP2P0DP57 97 aa24.86■■□□□ 1.57
PDLIM4-206ENST00000474421 GADL1Q6ZQY3 521 aa24.86■■□□□ 1.57
PDLIM4-206ENST00000474421 CERS3Q8IU89 383 aa24.86■■□□□ 1.57
PDLIM4-206ENST00000474421 RPAP2Q8IXW5 612 aaPredicted RBP24.86■■□□□ 1.57
PDLIM4-206ENST00000474421 ZNF333Q96JL9 665 aa24.86■■□□□ 1.57
PDLIM4-206ENST00000474421 FOCADQ5VW36 1801 aa24.85■■□□□ 1.57
PDLIM4-206ENST00000474421 TRIM75PA6NK02 468 aa24.85■■□□□ 1.57
PDLIM4-206ENST00000474421 HMMRO75330 724 aa24.85■■□□□ 1.57
PDLIM4-206ENST00000474421 PSMC4P43686 418 aa24.85■■□□□ 1.57
PDLIM4-206ENST00000474421 AACSQ86V21 672 aa24.85■■□□□ 1.57
PDLIM4-206ENST00000474421 PIH1D3Q9NQM4 214 aaKnown RBP24.85■■□□□ 1.57
PDLIM4-206ENST00000474421 ZSWIM8A7E2V4 1837 aa24.84■■□□□ 1.57
PDLIM4-206ENST00000474421 ATAD5Q96QE3 1844 aa24.84■■□□□ 1.57
PDLIM4-206ENST00000474421 CDK5RAP2Q96SN8 1893 aa24.84■■□□□ 1.57
PDLIM4-206ENST00000474421 POTEFA5A3E0 1075 aa24.84■■□□□ 1.57
PDLIM4-206ENST00000474421 FAM196BA6NMK8 535 aa24.84■■□□□ 1.57
PDLIM4-206ENST00000474421 TGFBRAP1Q8WUH2 860 aa24.84■■□□□ 1.57
PDLIM4-206ENST00000474421 IDH1O75874 414 aaKnown RBP24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 FMNL1O95466 1100 aaPredicted RBP24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 CYP2C8P10632 490 aa24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 BCRP11274 1271 aa24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 CAP2P40123 477 aa24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 ADGRA1Q86SQ6 560 aa24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 TRIM34Q9BYJ4 488 aa24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 SRRDQ9UH36 339 aa24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 RCAN3Q9UKA8 241 aa24.83■■□□□ 1.57
PDLIM4-206ENST00000474421 FLT1P17948 1338 aa24.83■■□□□ 1.56
PDLIM4-206ENST00000474421 CYP7A1P22680 504 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 MAP3K12Q12852 859 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 PRPF38BQ5VTL8 546 aaKnown RBP24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 FOXP4Q8IVH2 680 aaPredicted RBP24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 MAPKAPK5Q8IW41 473 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 PROCA1Q8NCQ7 364 aaPredicted RBP24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 ZNF280CQ8ND82 737 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 RHPN1Q8TCX5 695 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 TRIM47Q96LD4 638 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 PNMA3Q9UL41 463 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 AGTPBP1Q9UPW5 1226 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 COG6Q9Y2V7 657 aa24.82■■□□□ 1.56
PDLIM4-206ENST00000474421 FCGRTP55899 365 aa24.81■■□□□ 1.56
PDLIM4-206ENST00000474421 CLASRPQ8N2M8 674 aaKnown RBP24.81■■□□□ 1.56
PDLIM4-206ENST00000474421 SMCR8Q8TEV9 937 aaPredicted RBP24.81■■□□□ 1.56
PDLIM4-206ENST00000474421 AS3MTQ9HBK9 375 aa24.81■■□□□ 1.56
PDLIM4-206ENST00000474421 ZBTB40Q9NUA8 1239 aa24.81■■□□□ 1.56
PDLIM4-206ENST00000474421 BRCA2P51587 3418 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 USP17L5A8MUK1 530 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 OSBPP22059 807 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 SPP2Q13103 211 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 SLC4A8Q2Y0W8 1093 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 METTL16Q86W50 562 aaKnown RBP24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 CRACR2BQ8N4Y2 399 aaPredicted RBP24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 KIF1BPQ96EK5 621 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 GINM1Q9NU53 330 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 MGAMO43451 1857 aa24.8■■□□□ 1.56
PDLIM4-206ENST00000474421 HLA-DOAP06340 250 aa24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 CTGFP29279 349 aa24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 PABPC4Q13310 644 aaKnown RBP eCLIP24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 TTF1Q15361 905 aaPredicted RBP24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 CCDC84Q86UT8 332 aaPredicted RBP24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 MAGEB6Q8N7X4 407 aa24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 RAET1EQ8TD07 263 aa24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 IL1RAPL2Q9NP60 686 aa24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 MYPNQ86TC9 1320 aa24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 SIPA1L1O43166 1804 aa24.79■■□□□ 1.56
PDLIM4-206ENST00000474421 ECM2O94769 699 aaPredicted RBP24.78■■□□□ 1.56
PDLIM4-206ENST00000474421 ASNSP08243 561 aa24.78■■□□□ 1.56
PDLIM4-206ENST00000474421 SH3TC2Q8TF17 1288 aa24.78■■□□□ 1.56
PDLIM4-206ENST00000474421 MKI67P46013 3256 aaKnown RBP24.78■■□□□ 1.56
PDLIM4-206ENST00000474421 LOC285556D6RIA3 1793 aa24.77■■□□□ 1.56
PDLIM4-206ENST00000474421 RAB11FIP3O75154 756 aa24.77■■□□□ 1.56
PDLIM4-206ENST00000474421 EN2P19622 333 aaPredicted RBP24.77■■□□□ 1.56
PDLIM4-206ENST00000474421 PALD1Q9ULE6 856 aa24.77■■□□□ 1.56
PDLIM4-206ENST00000474421 MYH1P12882 1939 aa24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 IFIT2P09913 472 aaKnown RBP24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 USP5P45974 858 aa24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 DYNLL1P63167 89 aaKnown RBP24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 RRP1BQ14684 758 aaKnown RBP24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 MIGA1Q8NAN2 632 aa24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 WDR18Q9BV38 432 aa24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 ANTXR1Q9H6X2 564 aa24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 NDUFB9Q9Y6M9 179 aa24.76■■□□□ 1.55
PDLIM4-206ENST00000474421 GRK4P32298 578 aa24.75■■□□□ 1.55
PDLIM4-206ENST00000474421 HMGCS2P54868 508 aa24.75■■□□□ 1.55
PDLIM4-206ENST00000474421 SH3D19Q5HYK7 790 aa24.75■■□□□ 1.55
PDLIM4-206ENST00000474421 TREML2Q5T2D2 321 aa24.75■■□□□ 1.55
PDLIM4-206ENST00000474421 SAP30BPQ9UHR5 308 aaKnown RBP24.75■■□□□ 1.55
PDLIM4-206ENST00000474421 APBB1O00213 710 aa24.74■■□□□ 1.55
PDLIM4-206ENST00000474421 GCLCP48506 637 aaPredicted RBP24.74■■□□□ 1.55
PDLIM4-206ENST00000474421 PDE3AQ14432 1141 aa24.74■■□□□ 1.55
PDLIM4-206ENST00000474421 SIRT2Q8IXJ6 389 aa24.74■■□□□ 1.55
PDLIM4-206ENST00000474421 DNAJC18Q9H819 358 aa24.74■■□□□ 1.55
PDLIM4-206ENST00000474421 PRKCZQ05513 592 aa24.73■■□□□ 1.55
PDLIM4-206ENST00000474421 FAM110CQ1W6H9 321 aa24.73■■□□□ 1.55
PDLIM4-206ENST00000474421 TMOD4Q9NZQ9 345 aa24.73■■□□□ 1.55
PDLIM4-206ENST00000474421 C19orf81C9J6K1 198 aa24.72■■□□□ 1.55
PDLIM4-206ENST00000474421 TNPO2O14787 897 aaKnown RBP24.72■■□□□ 1.55
PDLIM4-206ENST00000474421 MYCP01106 439 aaPredicted RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms