RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 CHMP4BQ9H444 224 aaKnown RBP19.28■□□□□ 0.68
CDPF1-205ENST00000474256 IL1RAPL2Q9NP60 686 aa19.28■□□□□ 0.68
CDPF1-205ENST00000474256 NDUFB9Q9Y6M9 179 aa19.28■□□□□ 0.68
CDPF1-205ENST00000474256 FLT1P17948 1338 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 TRIM75PA6NK02 468 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 HMMRO75330 724 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 IDH1O75874 414 aaKnown RBP19.27■□□□□ 0.68
CDPF1-205ENST00000474256 BCRP11274 1271 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 CYP7A1P22680 504 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 CAP2P40123 477 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 TMED8Q6PL24 325 aaPredicted RBP19.27■□□□□ 0.68
CDPF1-205ENST00000474256 METTL16Q86W50 562 aaKnown RBP19.27■□□□□ 0.68
CDPF1-205ENST00000474256 MAPKAPK5Q8IW41 473 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 KIF1BPQ96EK5 621 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 ZNF333Q96JL9 665 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 ANTXR1Q9H6X2 564 aa19.27■□□□□ 0.68
CDPF1-205ENST00000474256 MAST2Q6P0Q8 1798 aa19.27■□□□□ 0.67
CDPF1-205ENST00000474256 POTEFA5A3E0 1075 aa19.26■□□□□ 0.67
CDPF1-205ENST00000474256 PRMT2P55345 433 aa19.26■□□□□ 0.67
CDPF1-205ENST00000474256 DYNLL1P63167 89 aaKnown RBP19.26■□□□□ 0.67
CDPF1-205ENST00000474256 GADL1Q6ZQY3 521 aa19.26■□□□□ 0.67
CDPF1-205ENST00000474256 CERS3Q8IU89 383 aa19.26■□□□□ 0.67
CDPF1-205ENST00000474256 CLASRPQ8N2M8 674 aaKnown RBP19.26■□□□□ 0.67
CDPF1-205ENST00000474256 TBC1D2Q9BYX2 928 aa19.26■□□□□ 0.67
CDPF1-205ENST00000474256 TNRC18O15417 2968 aaPredicted RBP19.25■□□□□ 0.67
CDPF1-205ENST00000474256 PSMC4P43686 418 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 MAP3K12Q12852 859 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 PDE3AQ14432 1141 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 SLC9C1Q4G0N8 1177 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 NBPF11Q86T75 865 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 FOXP4Q8IVH2 680 aaPredicted RBP19.25■□□□□ 0.67
CDPF1-205ENST00000474256 MAGEB6Q8N7X4 407 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 ZNF280CQ8ND82 737 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 DNAJC18Q9H819 358 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 PALD1Q9ULE6 856 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 AGTPBP1Q9UPW5 1226 aa19.25■□□□□ 0.67
CDPF1-205ENST00000474256 RAB11FIP3O75154 756 aa19.24■□□□□ 0.67
CDPF1-205ENST00000474256 SPP2Q13103 211 aa19.24■□□□□ 0.67
CDPF1-205ENST00000474256 C20orf194Q5TEA3 1177 aa19.24■□□□□ 0.67
CDPF1-205ENST00000474256 MIGA1Q8NAN2 632 aa19.24■□□□□ 0.67
CDPF1-205ENST00000474256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.24■□□□□ 0.67
CDPF1-205ENST00000474256 SRRDQ9UH36 339 aa19.24■□□□□ 0.67
CDPF1-205ENST00000474256 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
CDPF1-205ENST00000474256 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
CDPF1-205ENST00000474256 APBB1O00213 710 aa19.23■□□□□ 0.67
CDPF1-205ENST00000474256 OSBPP22059 807 aa19.23■□□□□ 0.67
CDPF1-205ENST00000474256 PROCA1Q8NCQ7 364 aaPredicted RBP19.23■□□□□ 0.67
CDPF1-205ENST00000474256 ECM2O94769 699 aaPredicted RBP19.22■□□□□ 0.67
CDPF1-205ENST00000474256 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
CDPF1-205ENST00000474256 IFIT2P09913 472 aaKnown RBP19.22■□□□□ 0.67
CDPF1-205ENST00000474256 HOXD10P28358 340 aa19.22■□□□□ 0.67
CDPF1-205ENST00000474256 TTF1Q15361 905 aaPredicted RBP19.22■□□□□ 0.67
CDPF1-205ENST00000474256 SH3D19Q5HYK7 790 aa19.22■□□□□ 0.67
CDPF1-205ENST00000474256 TREML2Q5T2D2 321 aa19.22■□□□□ 0.67
CDPF1-205ENST00000474256 HLA-DOAP06340 250 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 ASNSP08243 561 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 FCGRTP55899 365 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 JAG1P78504 1218 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 CRACR2BQ8N4Y2 399 aaPredicted RBP19.21■□□□□ 0.67
CDPF1-205ENST00000474256 SH3TC2Q8TF17 1288 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 WDR18Q9BV38 432 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 AS3MTQ9HBK9 375 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 GINM1Q9NU53 330 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 SAP30BPQ9UHR5 308 aaKnown RBP19.21■□□□□ 0.67
CDPF1-205ENST00000474256 CENPFP49454 3210 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 PHIPQ8WWQ0 1821 aa19.21■□□□□ 0.67
CDPF1-205ENST00000474256 EN2P19622 333 aaPredicted RBP19.2■□□□□ 0.66
CDPF1-205ENST00000474256 HMGCS2P54868 508 aa19.2■□□□□ 0.66
CDPF1-205ENST00000474256 SMCR8Q8TEV9 937 aaPredicted RBP19.2■□□□□ 0.66
CDPF1-205ENST00000474256 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
CDPF1-205ENST00000474256 TMEM106CQ9BVX2 250 aa19.2■□□□□ 0.66
CDPF1-205ENST00000474256 TRIM34Q9BYJ4 488 aa19.2■□□□□ 0.66
CDPF1-205ENST00000474256 PNMA3Q9UL41 463 aa19.2■□□□□ 0.66
CDPF1-205ENST00000474256 SIPA1L1O43166 1804 aa19.19■□□□□ 0.66
CDPF1-205ENST00000474256 USP5P45974 858 aa19.19■□□□□ 0.66
CDPF1-205ENST00000474256 MYPNQ86TC9 1320 aa19.19■□□□□ 0.66
CDPF1-205ENST00000474256 MYO5AQ9Y4I1 1855 aaKnown RBP19.18■□□□□ 0.66
CDPF1-205ENST00000474256 GOLIM4O00461 696 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 GDF11O95390 407 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 PDE6AP16499 860 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 BACE1P56817 501 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 PRKCZQ05513 592 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
CDPF1-205ENST00000474256 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 PRPF38BQ5VTL8 546 aaKnown RBP19.18■□□□□ 0.66
CDPF1-205ENST00000474256 RAET1EQ8TD07 263 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 EHD4Q9H223 541 aa19.18■□□□□ 0.66
CDPF1-205ENST00000474256 PTPRFP10586 1907 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 PDE4DIPQ5VU43 2346 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 PABPC4Q13310 644 aaKnown RBP eCLIP19.17■□□□□ 0.66
CDPF1-205ENST00000474256 MTMR2Q13614 643 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 SLC4A8Q2Y0W8 1093 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 TATDN1Q6P1N9 297 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 ANKRD13CQ8N6S4 541 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 DNAJC2Q99543 621 aaKnown RBP19.17■□□□□ 0.66
CDPF1-205ENST00000474256 ZBTB21Q9ULJ3 1066 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 BRCA2P51587 3418 aa19.17■□□□□ 0.66
CDPF1-205ENST00000474256 FOCADQ5VW36 1801 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms