RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
USF1-205ENST00000473969 SLC4A4Q9Y6R1 1079 aa16.53■□□□□ 0.24
USF1-205ENST00000473969 CA12O43570 354 aa16.52■□□□□ 0.24
USF1-205ENST00000473969 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
USF1-205ENST00000473969 GNAT2P19087 354 aa16.52■□□□□ 0.24
USF1-205ENST00000473969 MAP3K10Q02779 954 aa16.52■□□□□ 0.24
USF1-205ENST00000473969 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.24
USF1-205ENST00000473969 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
USF1-205ENST00000473969 ZIC5Q96T25 663 aa16.52■□□□□ 0.24
USF1-205ENST00000473969 SPDYE5A6NIY4 337 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 CHGBP05060 677 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 NOL9Q5SY16 702 aaKnown RBP16.51■□□□□ 0.23
USF1-205ENST00000473969 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 TICAM2Q86XR7 235 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 OSBP2Q969R2 916 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 SNCAIPQ9Y6H5 919 aa16.51■□□□□ 0.23
USF1-205ENST00000473969 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
USF1-205ENST00000473969 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
USF1-205ENST00000473969 APPP05067 770 aa16.5■□□□□ 0.23
USF1-205ENST00000473969 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
USF1-205ENST00000473969 GTF2A2P52657 109 aa16.5■□□□□ 0.23
USF1-205ENST00000473969 PPATQ06203 517 aa16.5■□□□□ 0.23
USF1-205ENST00000473969 STRBPQ96SI9 672 aaKnown RBP16.5■□□□□ 0.23
USF1-205ENST00000473969 DCP1AQ9NPI6 582 aaPredicted RBP16.5■□□□□ 0.23
USF1-205ENST00000473969 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
USF1-205ENST00000473969 GPAA1O43292 621 aa16.49■□□□□ 0.23
USF1-205ENST00000473969 PRKAB2O43741 272 aa16.49■□□□□ 0.23
USF1-205ENST00000473969 TM4SF4P48230 202 aa16.49■□□□□ 0.23
USF1-205ENST00000473969 PPIL2Q13356 520 aa16.49■□□□□ 0.23
USF1-205ENST00000473969 NACAP1Q9BZK3 213 aa16.49■□□□□ 0.23
USF1-205ENST00000473969 HIP1O00291 1037 aa16.48■□□□□ 0.23
USF1-205ENST00000473969 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
USF1-205ENST00000473969 SNAPC2Q13487 334 aa16.48■□□□□ 0.23
USF1-205ENST00000473969 ZMYM1Q5SVZ6 1142 aa16.48■□□□□ 0.23
USF1-205ENST00000473969 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
USF1-205ENST00000473969 EHD4Q9H223 541 aa16.48■□□□□ 0.23
USF1-205ENST00000473969 HELLSQ9NRZ9 838 aa16.48■□□□□ 0.23
USF1-205ENST00000473969 PATL2C9JE40 543 aaKnown RBP16.47■□□□□ 0.23
USF1-205ENST00000473969 M0R2C6 588 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 FOXN1O15353 648 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 TRPA1O75762 1119 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 SLURP2P0DP57 97 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 CETPP11597 493 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 PDE4AP27815 886 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 GJA5P36382 358 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 CAP2P40123 477 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 TDO2P48775 406 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 GIMAP6Q6P9H5 292 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 METTL16Q86W50 562 aaKnown RBP16.47■□□□□ 0.23
USF1-205ENST00000473969 DIAPH3Q9NSV4 1193 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 GINM1Q9NU53 330 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 SAGE1Q9NXZ1 904 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
USF1-205ENST00000473969 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 USP17L12C9JPN9 530 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 USP17L21D6R901 530 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 IRF6O14896 467 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 ASNSP08243 561 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 PTPRAP18433 802 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 PLCD1P51178 756 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
USF1-205ENST00000473969 CCL15Q16663 113 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 ERICH6BQ5W0A0 696 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 AS3MTQ9HBK9 375 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 CABP5Q9NP86 173 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 RNF186Q9NXI6 227 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 ARPP21Q9UBL0 812 aaPredicted RBP16.46■□□□□ 0.23
USF1-205ENST00000473969 SWAP70Q9UH65 585 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
USF1-205ENST00000473969 THSD7BQ9C0I4 1608 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 MYH7P12883 1935 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 USP17L5A8MUK1 530 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 CXCL11O14625 94 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 SDSP20132 328 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
USF1-205ENST00000473969 MCMDC2Q4G0Z9 681 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 TTC22Q5TAA0 569 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 IFNL1Q8IU54 200 aa16.45■□□□□ 0.22
USF1-205ENST00000473969 SEC62Q99442 399 aaKnown RBP16.45■□□□□ 0.22
USF1-205ENST00000473969 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
USF1-205ENST00000473969 MINDY4BA8MYZ0 360 aa16.44■□□□□ 0.22
USF1-205ENST00000473969 GDF11O95390 407 aa16.44■□□□□ 0.22
USF1-205ENST00000473969 CYP2D6P10635 497 aa16.44■□□□□ 0.22
USF1-205ENST00000473969 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
USF1-205ENST00000473969 C12orf60Q5U649 245 aa16.44■□□□□ 0.22
USF1-205ENST00000473969 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
USF1-205ENST00000473969 NAPBQ9H115 298 aa16.44■□□□□ 0.22
USF1-205ENST00000473969 TESPA1A2RU30 521 aaPredicted RBP16.43■□□□□ 0.22
USF1-205ENST00000473969 MPHOSPH10O00566 681 aaKnown RBP16.43■□□□□ 0.22
USF1-205ENST00000473969 SLC3A2P08195 630 aaKnown RBP16.43■□□□□ 0.22
USF1-205ENST00000473969 HSPA8P11142 646 aaKnown RBP16.43■□□□□ 0.22
USF1-205ENST00000473969 LBX1P52954 281 aa16.43■□□□□ 0.22
USF1-205ENST00000473969 NMIQ13287 307 aaPredicted RBP16.43■□□□□ 0.22
USF1-205ENST00000473969 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
USF1-205ENST00000473969 TATDN1Q6P1N9 297 aa16.43■□□□□ 0.22
USF1-205ENST00000473969 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
USF1-205ENST00000473969 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms