RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-209ENST00000473783 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
SSBP1-209ENST00000473783 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
SSBP1-209ENST00000473783 EPHA10Q5JZY3 1008 aa13.29□□□□□ -0.28
SSBP1-209ENST00000473783 WDR66Q8TBY9 1149 aa13.29□□□□□ -0.28
SSBP1-209ENST00000473783 PUS3Q9BZE2 481 aaKnown RBP13.29□□□□□ -0.28
SSBP1-209ENST00000473783 ASCC2Q9H1I8 757 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-209ENST00000473783 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
SSBP1-209ENST00000473783 MYH2Q9UKX2 1941 aa13.29□□□□□ -0.28
SSBP1-209ENST00000473783 DNM1LO00429 736 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 MSCO60682 206 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 ENTPD3O75355 529 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 MRPS5P82675 430 aaKnown RBP13.28□□□□□ -0.28
SSBP1-209ENST00000473783 RALBP1Q15311 655 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 ZFPM1Q8IX07 1006 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 BADQ92934 168 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
SSBP1-209ENST00000473783 TCF20Q9UGU0 1960 aaKnown RBP13.27□□□□□ -0.28
SSBP1-209ENST00000473783 MAPK4P31152 587 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 RGS2P41220 211 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 DIXDC1Q155Q3 683 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 LPAR1Q92633 364 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 USP6NLQ92738 828 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.29
SSBP1-209ENST00000473783 APBA2Q99767 749 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 IDI2Q9BXS1 227 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 ATP11BQ9Y2G3 1177 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 RFX7Q2KHR2 1363 aa13.27□□□□□ -0.29
SSBP1-209ENST00000473783 GRM8O00222 908 aa13.26□□□□□ -0.29
SSBP1-209ENST00000473783 DNAJB2P25686 324 aa13.26□□□□□ -0.29
SSBP1-209ENST00000473783 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-209ENST00000473783 RGS3P49796 1198 aa13.26□□□□□ -0.29
SSBP1-209ENST00000473783 HMGCS2P54868 508 aa13.26□□□□□ -0.29
SSBP1-209ENST00000473783 CCL14Q16627 93 aa13.26□□□□□ -0.29
SSBP1-209ENST00000473783 AKNAD1Q5T1N1 836 aa13.26□□□□□ -0.29
SSBP1-209ENST00000473783 CCDC84Q86UT8 332 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-209ENST00000473783 ZSCAN29Q8IWY8 852 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-209ENST00000473783 ZNF280CQ8ND82 737 aa13.26□□□□□ -0.29
SSBP1-209ENST00000473783 GAS2L1Q99501 681 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-209ENST00000473783 PRDM5Q9NQX1 630 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-209ENST00000473783 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-209ENST00000473783 DDX20Q9UHI6 824 aaKnown RBP13.26□□□□□ -0.29
SSBP1-209ENST00000473783 PDE8BO95263 885 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
SSBP1-209ENST00000473783 SPP2Q13103 211 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
SSBP1-209ENST00000473783 SH3D19Q5HYK7 790 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 SH3BP5LQ7L8J4 393 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 VGLL2Q8N8G2 317 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 ZNF576Q9H609 170 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 PDLIM7Q9NR12 457 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
SSBP1-209ENST00000473783 SNX17Q15036 470 aa13.24□□□□□ -0.29
SSBP1-209ENST00000473783 METTL24Q5JXM2 366 aa13.24□□□□□ -0.29
SSBP1-209ENST00000473783 MORN1Q5T089 497 aa13.24□□□□□ -0.29
SSBP1-209ENST00000473783 BEND3Q5T5X7 828 aa13.24□□□□□ -0.29
SSBP1-209ENST00000473783 MFSD14CQ5VZR4 134 aa13.24□□□□□ -0.29
SSBP1-209ENST00000473783 SLC39A5Q6ZMH5 540 aa13.24□□□□□ -0.29
SSBP1-209ENST00000473783 UTYO14607 1347 aa13.23□□□□□ -0.29
SSBP1-209ENST00000473783 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-209ENST00000473783 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-209ENST00000473783 DDTLA6NHG4 134 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-209ENST00000473783 TBC1D12O60347 775 aa13.23□□□□□ -0.29
SSBP1-209ENST00000473783 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
SSBP1-209ENST00000473783 PRDX5P30044 214 aa13.23□□□□□ -0.29
SSBP1-209ENST00000473783 POTEEQ6S8J3 1075 aa13.23□□□□□ -0.29
SSBP1-209ENST00000473783 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
SSBP1-209ENST00000473783 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
SSBP1-209ENST00000473783 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
SSBP1-209ENST00000473783 SNX27Q96L92 541 aa13.23□□□□□ -0.29
SSBP1-209ENST00000473783 OSBPL5Q9H0X9 879 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-209ENST00000473783 MYBBP1AQ9BQG0 1328 aaKnown RBP13.22□□□□□ -0.29
SSBP1-209ENST00000473783 APAF1O14727 1248 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 LDHBP07195 334 aaKnown RBP13.22□□□□□ -0.29
SSBP1-209ENST00000473783 HOXA7P31268 230 aaPredicted RBP13.22□□□□□ -0.29
SSBP1-209ENST00000473783 HERVK_113P62684 666 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 MAP2K5Q13163 448 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
SSBP1-209ENST00000473783 TRIM60Q495X7 471 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 PLEKHH3Q7Z736 793 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 ARRDC4Q8NCT1 418 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 TSR2Q969E8 191 aaKnown RBP13.22□□□□□ -0.29
SSBP1-209ENST00000473783 TIFAQ96CG3 184 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 LRFN3Q9BTN0 628 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 PLXNA1Q9UIW2 1896 aa13.22□□□□□ -0.29
SSBP1-209ENST00000473783 TRIM43BA6NCK2 446 aa13.21□□□□□ -0.29
SSBP1-209ENST00000473783 KBTBD13C9JR72 458 aa13.21□□□□□ -0.29
SSBP1-209ENST00000473783 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
SSBP1-209ENST00000473783 ERVK-9P63128 1117 aa13.21□□□□□ -0.29
SSBP1-209ENST00000473783 ERVK-24P63145 666 aa13.21□□□□□ -0.29
SSBP1-209ENST00000473783 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
SSBP1-209ENST00000473783 GTF3C2Q8WUA4 911 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-209ENST00000473783 TRIM43Q96BQ3 446 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-209ENST00000473783 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
SSBP1-209ENST00000473783 PORCNQ9H237 461 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms