RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	PWP1	Q13610	501 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	PDE3A	Q14432	1141 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	NAALADL2	Q58DX5	795 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	C9orf131	Q5VYM1	1079 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	SV2B	Q7L1I2	683 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	ZNF654	Q8IZM8	581 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	RSRP1	Q9BUV0	290 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	CEP44	Q9C0F1	390 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	CCSER2	Q9H7U1	834 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	GGT7	Q9UJ14	662 aa		7.43	□□□□□ -1.22
BBX-223	ENST00000473542	TTF2	Q9UNY4	1162 aa	Known RBP	7.43	□□□□□ -1.22
BBX-223	ENST00000473542	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.43	□□□□□ -1.22
BBX-223	ENST00000473542	TMPRSS2	O15393	492 aa		7.42	□□□□□ -1.22
BBX-223	ENST00000473542	EIF4EBP3	O60516	100 aa	Predicted RBP	7.42	□□□□□ -1.22
BBX-223	ENST00000473542	FAM87A	P0C7U9	286 aa		7.42	□□□□□ -1.22
BBX-223	ENST00000473542	CD8B	P10966	210 aa		7.42	□□□□□ -1.22
BBX-223	ENST00000473542	USP48	Q86UV5	1035 aa		7.42	□□□□□ -1.22
BBX-223	ENST00000473542	ZC3H12C	Q9C0D7	883 aa	Known RBP	7.42	□□□□□ -1.22
BBX-223	ENST00000473542	RNASE1	P07998	156 aa	Known RBP	7.41	□□□□□ -1.22
BBX-223	ENST00000473542	ZNF157	P51786	506 aa	Predicted RBP	7.41	□□□□□ -1.22
BBX-223	ENST00000473542	SF3A1	Q15459	793 aa	Known RBP	7.41	□□□□□ -1.22
BBX-223	ENST00000473542	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.41	□□□□□ -1.22
BBX-223	ENST00000473542	SREK1	Q8WXA9	508 aa	Known RBP	7.41	□□□□□ -1.22
BBX-223	ENST00000473542	MBNL3	Q9NUK0	354 aa	Known RBP	7.41	□□□□□ -1.22
BBX-223	ENST00000473542	AKAP2	Q9Y2D5	859 aa		7.41	□□□□□ -1.22
BBX-223	ENST00000473542	GNL2	Q13823	731 aa	Known RBP	7.4	□□□□□ -1.22
BBX-223	ENST00000473542	CCDC85B	Q15834	202 aa	Predicted RBP	7.4	□□□□□ -1.22
BBX-223	ENST00000473542	STK11IP	Q8N1F8	1099 aa		7.4	□□□□□ -1.22
BBX-223	ENST00000473542	TINF2	Q9BSI4	451 aa		7.4	□□□□□ -1.22
BBX-223	ENST00000473542	CCDC86	Q9H6F5	360 aa	Known RBP	7.4	□□□□□ -1.22
BBX-223	ENST00000473542	RC3H2	Q9HBD1	1191 aa	Known RBP	7.4	□□□□□ -1.22
BBX-223	ENST00000473542	LEFTY1	O75610	366 aa		7.39	□□□□□ -1.23
BBX-223	ENST00000473542	FUT4	P22083	530 aa		7.39	□□□□□ -1.23
BBX-223	ENST00000473542	RACK1	P63244	317 aa	Known RBP	7.39	□□□□□ -1.23
BBX-223	ENST00000473542	CYP27C1	Q4G0S4	372 aa		7.39	□□□□□ -1.23
BBX-223	ENST00000473542	FAM168A	Q92567	244 aa		7.39	□□□□□ -1.23
BBX-223	ENST00000473542	DRC1	Q96MC2	740 aa		7.39	□□□□□ -1.23
BBX-223	ENST00000473542	CRIM1	Q9NZV1	1036 aa		7.39	□□□□□ -1.23
BBX-223	ENST00000473542	ZNF862	O60290	1169 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	IGSF3	O75054	1194 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	FAAP100	Q0VG06	881 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	ZNF394	Q53GI3	561 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	RELL1	Q8IUW5	271 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	LRRN4CL	Q8ND94	238 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	NETO1	Q8TDF5	533 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	NECAB3	Q96P71	396 aa	Predicted RBP	7.38	□□□□□ -1.23
BBX-223	ENST00000473542	FANCD2OS	Q96PS1	177 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	GML	Q99445	158 aa		7.38	□□□□□ -1.23
BBX-223	ENST00000473542	BIN1	O00499	593 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	RPS26	P62854	115 aa	Known RBP	7.37	□□□□□ -1.23
BBX-223	ENST00000473542	SPOCD1	Q6ZMY3	1216 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	ATG4D	Q86TL0	474 aa	Predicted RBP	7.37	□□□□□ -1.23
BBX-223	ENST00000473542	MISP3	Q96FF7	219 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	TMEM74	Q96NL1	305 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	ACBD3	Q9H3P7	528 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	KCNQ5	Q9NR82	932 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	DISC1	Q9NRI5	854 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	PCDHGC5	Q9Y5F6	944 aa		7.37	□□□□□ -1.23
BBX-223	ENST00000473542	SYNGAP1	Q96PV0	1343 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	GJA8	P48165	433 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	PPP2R3A	Q06190	1150 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	AP3B2	Q13367	1082 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	TTLL4	Q14679	1199 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	TPTE2	Q6XPS3	522 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	DDX54	Q8TDD1	881 aa	Known RBP	7.36	□□□□□ -1.23
BBX-223	ENST00000473542	SPATA32	Q96LK8	384 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	KRTAP4-2	Q9BYR5	136 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	TMEM39A	Q9NV64	488 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	KBTBD4	Q9NVX7	518 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	PLAGL2	Q9UPG8	496 aa		7.36	□□□□□ -1.23
BBX-223	ENST00000473542	DBX1	A6NMT0	343 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	ENC1	O14682	589 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	FARP2	O94887	1054 aa	Predicted RBP	7.35	□□□□□ -1.23
BBX-223	ENST00000473542	HCLS1	P14317	486 aa	Predicted RBP	7.35	□□□□□ -1.23
BBX-223	ENST00000473542	SCARA3	Q6AZY7	606 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.35	□□□□□ -1.23
BBX-223	ENST00000473542	PIDD1	Q9HB75	910 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	CAPN10	Q9HC96	672 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	COPRS	Q9NQ92	184 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	USP35	Q9P2H5	1018 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	INPP5F	Q9Y2H2	1132 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	SAMM50	Q9Y512	469 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	PCDHGB7	Q9Y5F8	929 aa		7.35	□□□□□ -1.23
BBX-223	ENST00000473542	LIG3	P49916	1009 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	OXCT1	P55809	520 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	ID3	Q02535	119 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	PRKCQ	Q04759	706 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	AOC3	Q16853	763 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	AGMO	Q6ZNB7	445 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	PHC3	Q8NDX5	983 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	PI4K2B	Q8TCG2	481 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	RASGRP4	Q8TDF6	673 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	ARMC5	Q96C12	935 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	RHOV	Q96L33	236 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	PRDM7	Q9NQW5	492 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	VAV3	Q9UKW4	847 aa		7.34	□□□□□ -1.23
BBX-223	ENST00000473542	RNGTT	O60942	597 aa	Known RBP	7.33	□□□□□ -1.24
BBX-223	ENST00000473542	NEFM	P07197	916 aa		7.33	□□□□□ -1.24
BBX-223	ENST00000473542	CELA3A	P09093	270 aa		7.33	□□□□□ -1.24
BBX-223	ENST00000473542	KIF4B	Q2VIQ3	1234 aa		7.33	□□□□□ -1.24

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