RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 SAGE1Q9NXZ1 904 aa21.33■■□□□ 1.01
RPUSD3-214ENST00000473522 CTCFP49711 727 aaPredicted RBP21.32■■□□□ 1
RPUSD3-214ENST00000473522 TTC6Q86TZ1 520 aa21.32■■□□□ 1
RPUSD3-214ENST00000473522 SCYL3Q8IZE3 742 aa21.32■■□□□ 1
RPUSD3-214ENST00000473522 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
RPUSD3-214ENST00000473522 RNF186Q9NXI6 227 aa21.32■■□□□ 1
RPUSD3-214ENST00000473522 THSD7BQ9C0I4 1608 aa21.32■■□□□ 1
RPUSD3-214ENST00000473522 HLA-DOAP06340 250 aa21.31■■□□□ 1
RPUSD3-214ENST00000473522 PPIL2Q13356 520 aa21.31■■□□□ 1
RPUSD3-214ENST00000473522 EHD4Q9H223 541 aa21.31■■□□□ 1
RPUSD3-214ENST00000473522 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.31■■□□□ 1
RPUSD3-214ENST00000473522 SAP30BPQ9UHR5 308 aaKnown RBP21.31■■□□□ 1
RPUSD3-214ENST00000473522 IRF6O14896 467 aa21.3■■□□□ 1
RPUSD3-214ENST00000473522 PRKAB2O43741 272 aa21.3■■□□□ 1
RPUSD3-214ENST00000473522 GTF2A2P52657 109 aa21.3■■□□□ 1
RPUSD3-214ENST00000473522 RRP1BQ14684 758 aaKnown RBP21.3■■□□□ 1
RPUSD3-214ENST00000473522 SDR42E1Q8WUS8 393 aa21.3■■□□□ 1
RPUSD3-214ENST00000473522 OTUD5Q96G74 571 aa21.3■■□□□ 1
RPUSD3-214ENST00000473522 FSD1Q9BTV5 496 aa21.3■■□□□ 1
RPUSD3-214ENST00000473522 FAM196BA6NMK8 535 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 HSPA8P11142 646 aaKnown RBP21.29■■□□□ 1
RPUSD3-214ENST00000473522 PTPRAP18433 802 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 PDE4AP27815 886 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 CAP2P40123 477 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 PLCD1P51178 756 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 ZMYM1Q5SVZ6 1142 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 TATDN1Q6P1N9 297 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 PTPN18Q99952 460 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 CFHR5Q9BXR6 569 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 DNAJC18Q9H819 358 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 TAOK2Q9UL54 1235 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 KCNH4Q9UQ05 1017 aa21.29■■□□□ 1
RPUSD3-214ENST00000473522 CXCL11O14625 94 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 TRPA1O75762 1119 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 GABPAQ06546 454 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 IFNL1Q8IU54 200 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 PRDM10Q9NQV6 1147 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 PICK1Q9NRD5 415 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 MCM9Q9NXL9 1143 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 SERPINB13Q9UIV8 391 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 SLC4A4Q9Y6R1 1079 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 MAST2Q6P0Q8 1798 aa21.28■■□□□ 1
RPUSD3-214ENST00000473522 DOCK2Q92608 1830 aa21.27■■□□□ 1
RPUSD3-214ENST00000473522 ALDH1A1P00352 501 aa21.27■■□□□ 1
RPUSD3-214ENST00000473522 POLR3DP05423 398 aaPredicted RBP21.27■■□□□ 1
RPUSD3-214ENST00000473522 GIMAP6Q6P9H5 292 aa21.27■■□□□ 1
RPUSD3-214ENST00000473522 CRACR2BQ8N4Y2 399 aaPredicted RBP21.27■■□□□ 1
RPUSD3-214ENST00000473522 GINM1Q9NU53 330 aa21.27■■□□□ 1
RPUSD3-214ENST00000473522 AFG3L2Q9Y4W6 797 aa21.27■■□□□ 1
RPUSD3-214ENST00000473522 ZHX2Q9Y6X8 837 aa21.27■■□□□ 1
RPUSD3-214ENST00000473522 GSG1L2A8MUP6 293 aa21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 IGF2BP3O00425 579 aaKnown RBP eCLIP21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 GPAA1O43292 621 aa21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 CETPP11597 493 aa21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 GNAT2P19087 354 aa21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 LBX1P52954 281 aa21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 SNAPC2Q13487 334 aa21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 BRI3BPQ8WY22 251 aa21.26■□□□□ 0.99
RPUSD3-214ENST00000473522 PATL2C9JE40 543 aaKnown RBP21.25■□□□□ 0.99
RPUSD3-214ENST00000473522 M0R2C6 588 aa21.25■□□□□ 0.99
RPUSD3-214ENST00000473522 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
RPUSD3-214ENST00000473522 C12orf60Q5U649 245 aa21.25■□□□□ 0.99
RPUSD3-214ENST00000473522 OTUD7BQ6GQQ9 843 aa21.25■□□□□ 0.99
RPUSD3-214ENST00000473522 SEC62Q99442 399 aaKnown RBP21.25■□□□□ 0.99
RPUSD3-214ENST00000473522 CCL15-CCL14A0A0B4J2E2 113 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 USP17L12C9JPN9 530 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 USP17L21D6R901 530 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 JAG1P78504 1218 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 CCL15Q16663 113 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 SBK1Q52WX2 424 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 CTR9Q6PD62 1173 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 TRIM34Q9BYJ4 488 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 TBC1D2Q9BYX2 928 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 HELLSQ9NRZ9 838 aa21.24■□□□□ 0.99
RPUSD3-214ENST00000473522 TRIM6-TRIM34B2RNG4 842 aa21.23■□□□□ 0.99
RPUSD3-214ENST00000473522 ASNSP08243 561 aa21.23■□□□□ 0.99
RPUSD3-214ENST00000473522 MOGSQ13724 837 aa21.23■□□□□ 0.99
RPUSD3-214ENST00000473522 SLC4A8Q2Y0W8 1093 aa21.23■□□□□ 0.99
RPUSD3-214ENST00000473522 NOM1Q5C9Z4 860 aaKnown RBP21.23■□□□□ 0.99
RPUSD3-214ENST00000473522 DDRGK1Q96HY6 314 aa21.23■□□□□ 0.99
RPUSD3-214ENST00000473522 MYO5AQ9Y4I1 1855 aaKnown RBP21.23■□□□□ 0.99
RPUSD3-214ENST00000473522 USP17L5A8MUK1 530 aa21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 CYP2D6P10635 497 aa21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 SHMT1P34896 483 aa21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 CENPQQ7L2Z9 268 aaPredicted RBP21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 RILPL2Q969X0 211 aa21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 WDR18Q9BV38 432 aa21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 ZCCHC17Q9NP64 241 aaKnown RBP21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 TSKSQ9UJT2 592 aa21.22■□□□□ 0.99
RPUSD3-214ENST00000473522 TBC1D8O95759 1140 aa21.21■□□□□ 0.99
RPUSD3-214ENST00000473522 SDSP20132 328 aa21.21■□□□□ 0.99
RPUSD3-214ENST00000473522 EVX2Q03828 476 aa21.21■□□□□ 0.99
RPUSD3-214ENST00000473522 CERKLQ49MI3 558 aaPredicted RBP21.21■□□□□ 0.99
RPUSD3-214ENST00000473522 SWAP70Q9UH65 585 aa21.21■□□□□ 0.99
RPUSD3-214ENST00000473522 A0A0G2JLL6 359 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 BTBD19C9JJ37 291 aa21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 MCMDC2Q4G0Z9 681 aa21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 PRRT2Q7Z6L0 340 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 IFNL3Q8IZI9 196 aa21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 FAM43AQ8N2R8 423 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms