RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 MKL1Q969V6 931 aa9.47□□□□□ -0.89
SEC22A-204ENST00000473494 GSX1Q9H4S2 264 aaPredicted RBP9.47□□□□□ -0.89
SEC22A-204ENST00000473494 PIF1Q9H611 641 aa9.47□□□□□ -0.89
SEC22A-204ENST00000473494 CYP4F12Q9HCS2 524 aa9.47□□□□□ -0.89
SEC22A-204ENST00000473494 RAD18Q9NS91 495 aa9.47□□□□□ -0.89
SEC22A-204ENST00000473494 GMIPQ9P107 970 aa9.47□□□□□ -0.89
SEC22A-204ENST00000473494 SIRPGQ9P1W8 387 aa9.47□□□□□ -0.89
SEC22A-204ENST00000473494 FANCGO15287 622 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 PLCG1P19174 1290 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 CASP7P55210 303 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 MLECQ14165 292 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 PODNQ7Z5L7 613 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 C12orf40Q86WS4 652 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 TM9SF2Q99805 663 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 TRIM55Q9BYV6 548 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 ZSWIM4Q9H7M6 989 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 ACTR10Q9NZ32 417 aa9.46□□□□□ -0.9
SEC22A-204ENST00000473494 DNAJA2O60884 412 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 GRK4P32298 578 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 NFE2L2Q16236 605 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 PPM1JQ5JR12 505 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 GIMAP6Q6P9H5 292 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 Q6ZS46 218 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 TMEM130Q8N3G9 435 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 FANCD2OSQ96PS1 177 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 ATXN3LQ9H3M9 355 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 ANTXR1Q9H6X2 564 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 AP4E1Q9UPM8 1137 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 CSADQ9Y600 493 aa9.45□□□□□ -0.9
SEC22A-204ENST00000473494 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
SEC22A-204ENST00000473494 PGRP06401 933 aa9.44□□□□□ -0.9
SEC22A-204ENST00000473494 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
SEC22A-204ENST00000473494 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
SEC22A-204ENST00000473494 ANKRD34AQ69YU3 496 aa9.44□□□□□ -0.9
SEC22A-204ENST00000473494 ACSF2Q96CM8 615 aaPredicted RBP9.44□□□□□ -0.9
SEC22A-204ENST00000473494 DISC1Q9NRI5 854 aa9.44□□□□□ -0.9
SEC22A-204ENST00000473494 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
SEC22A-204ENST00000473494 K7ELQ4 463 aaPredicted RBP9.43□□□□□ -0.9
SEC22A-204ENST00000473494 TNFRSF10CO14798 259 aa9.43□□□□□ -0.9
SEC22A-204ENST00000473494 ETF1P62495 437 aaKnown RBP9.43□□□□□ -0.9
SEC22A-204ENST00000473494 SOX4Q06945 474 aaPredicted RBP9.43□□□□□ -0.9
SEC22A-204ENST00000473494 RASA3Q14644 834 aa9.43□□□□□ -0.9
SEC22A-204ENST00000473494 BMS1Q14692 1282 aaKnown RBP9.43□□□□□ -0.9
SEC22A-204ENST00000473494 CDCP2Q5VXM1 449 aa9.43□□□□□ -0.9
SEC22A-204ENST00000473494 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
SEC22A-204ENST00000473494 CNNM2Q9H8M5 875 aa9.43□□□□□ -0.9
SEC22A-204ENST00000473494 MSRB2Q9Y3D2 182 aa9.43□□□□□ -0.9
SEC22A-204ENST00000473494 SLC22A31A6NKX4 558 aa9.42□□□□□ -0.9
SEC22A-204ENST00000473494 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
SEC22A-204ENST00000473494 NEFMP07197 916 aa9.42□□□□□ -0.9
SEC22A-204ENST00000473494 NME1P15531 152 aaKnown RBP9.42□□□□□ -0.9
SEC22A-204ENST00000473494 DDR2Q16832 855 aa9.42□□□□□ -0.9
SEC22A-204ENST00000473494 SHISA2Q6UWI4 295 aa9.42□□□□□ -0.9
SEC22A-204ENST00000473494 RUFY4Q6ZNE9 571 aa9.42□□□□□ -0.9
SEC22A-204ENST00000473494 NLRC3Q7RTR2 1065 aa9.42□□□□□ -0.9
SEC22A-204ENST00000473494 MRPL41Q8IXM3 137 aaKnown RBP9.42□□□□□ -0.9
SEC22A-204ENST00000473494 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
SEC22A-204ENST00000473494 CDK11AQ9UQ88 783 aaPredicted RBP9.42□□□□□ -0.9
SEC22A-204ENST00000473494 CAP2P40123 477 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 FDX2Q6P4F2 183 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 LRP10Q7Z4F1 713 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 SLFN12Q8IYM2 578 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 AGGF1Q8N302 714 aaeCLIP9.41□□□□□ -0.9
SEC22A-204ENST00000473494 C2CD4AQ8NCU7 369 aaPredicted RBP9.41□□□□□ -0.9
SEC22A-204ENST00000473494 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 TNKS2Q9H2K2 1166 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 PICK1Q9NRD5 415 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 SNTG2Q9NY99 539 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 TJP2Q9UDY2 1190 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 ACTL7BQ9Y614 415 aa9.41□□□□□ -0.9
SEC22A-204ENST00000473494 CNTNAP5Q8WYK1 1306 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 ACRP10323 421 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 TTLL4Q14679 1199 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
SEC22A-204ENST00000473494 ZNF746Q6NUN9 644 aaPredicted RBP9.4□□□□□ -0.9
SEC22A-204ENST00000473494 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 HID1Q8IV36 788 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 BEND7Q8N7W2 519 aaPredicted RBP9.4□□□□□ -0.9
SEC22A-204ENST00000473494 KCT2Q8NC54 265 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 LENG1Q96BZ8 264 aaPredicted RBP9.4□□□□□ -0.9
SEC22A-204ENST00000473494 TMEM87BQ96K49 555 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 FBRSQ9HAH7 460 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 KLHL3Q9UH77 587 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 ADAMTS8Q9UP79 889 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 MAPK8IP1Q9UQF2 711 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 TBX22Q9Y458 520 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 SLC12A7Q9Y666 1083 aa9.4□□□□□ -0.9
SEC22A-204ENST00000473494 A0A1W2PQH9 124 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 SMARCA5O60264 1052 aaPredicted RBP9.39□□□□□ -0.91
SEC22A-204ENST00000473494 COL8A1P27658 744 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 PREPP48147 710 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 GRIK4Q16099 956 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 SLC6A19Q695T7 634 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 MCATQ8IVS2 390 aaKnown RBP9.39□□□□□ -0.91
SEC22A-204ENST00000473494 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 NACC1Q96RE7 527 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 AKTIPQ9H8T0 292 aa9.39□□□□□ -0.91
SEC22A-204ENST00000473494 TMA7Q9Y2S6 64 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms