RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 ADMP35318 185 aa7.57□□□□□ -1.2
CNOT4-209ENST00000473470 ETF1P62495 437 aaKnown RBP7.57□□□□□ -1.2
CNOT4-209ENST00000473470 CDK5R2Q13319 367 aa7.57□□□□□ -1.2
CNOT4-209ENST00000473470 OGFOD3Q6PK18 319 aa7.57□□□□□ -1.2
CNOT4-209ENST00000473470 ERMP1Q7Z2K6 904 aa7.57□□□□□ -1.2
CNOT4-209ENST00000473470 C12orf40Q86WS4 652 aa7.57□□□□□ -1.2
CNOT4-209ENST00000473470 WNT10AQ9GZT5 417 aa7.57□□□□□ -1.2
CNOT4-209ENST00000473470 CSADQ9Y600 493 aa7.57□□□□□ -1.2
CNOT4-209ENST00000473470 RB1CC1Q8TDY2 1594 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 FAM87AP0C7U9 286 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 SPINK2P20155 84 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 VAMP1P23763 118 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 GBP2P32456 591 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-209ENST00000473470 CAP2P40123 477 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 SNAP47Q5SQN1 464 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-209ENST00000473470 NBPF11Q86T75 865 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 METTL5Q9NRN9 209 aaKnown RBP7.56□□□□□ -1.2
CNOT4-209ENST00000473470 PCDHB5Q9Y5E4 795 aa7.56□□□□□ -1.2
CNOT4-209ENST00000473470 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 SSTR4P31391 388 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 PTPN11Q06124 597 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-209ENST00000473470 CAMK2GQ13555 558 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-209ENST00000473470 INPP5AQ14642 412 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 MSMPQ1L6U9 139 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 ZNF746Q6NUN9 644 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-209ENST00000473470 ARMCX6Q7L4S7 300 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 VSIG10LQ86VR7 867 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 HID1Q8IV36 788 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 TOP6BLQ8N6T0 577 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 MKNK2Q9HBH9 465 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 TLR6Q9Y2C9 796 aa7.55□□□□□ -1.2
CNOT4-209ENST00000473470 HYAL3O43820 417 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-209ENST00000473470 ARHGAP27Q6ZUM4 889 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 GATAD2BQ8WXI9 593 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 DUSP23Q9BVJ7 150 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 LGR6Q9HBX8 967 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 ADAM30Q9UKF2 790 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 ANGEL1Q9UNK9 670 aaKnown RBP7.54□□□□□ -1.2
CNOT4-209ENST00000473470 UNC13AQ9UPW8 1703 aa7.54□□□□□ -1.2
CNOT4-209ENST00000473470 ZNF76P36508 570 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 MPP2Q14168 576 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 MFSD2AQ8NA29 543 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 TMEM87AQ8NBN3 555 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 PSMG3-AS1Q96PY0 264 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 PRDM10Q9NQV6 1147 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 KBTBD4Q9NVX7 518 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 BSDC1Q9NW68 430 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-209ENST00000473470 GGT7Q9UJ14 662 aa7.53□□□□□ -1.2
CNOT4-209ENST00000473470 SUPT16HQ9Y5B9 1047 aaKnown RBP7.53□□□□□ -1.2
CNOT4-209ENST00000473470 CILPO75339 1184 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 PF4P02776 101 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 PRNPP04156 253 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 PGRP06401 933 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 GRK4P32298 578 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 STK11IPQ8N1F8 1099 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 MISP3Q96FF7 219 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 COX4I2Q96KJ9 171 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 LRRC3Q9BY71 257 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 FOXQ1Q9C009 403 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 LRRC4CQ9HCJ2 640 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 KCNQ5Q9NR82 932 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 MAPK8IP1Q9UQF2 711 aa7.52□□□□□ -1.21
CNOT4-209ENST00000473470 GFRA2O00451 464 aa7.51□□□□□ -1.21
CNOT4-209ENST00000473470 BNC2Q6ZN30 1099 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-209ENST00000473470 MRPL41Q8IXM3 137 aaKnown RBP7.51□□□□□ -1.21
CNOT4-209ENST00000473470 ROBO2Q9HCK4 1378 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 FAM221AA4D161 298 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
CNOT4-209ENST00000473470 RECKO95980 971 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 F13A1P00488 732 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 CEACAM5P06731 702 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
CNOT4-209ENST00000473470 FAM196AQ6ZSG2 479 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 REC114Q7Z4M0 266 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 GOLM1Q8NBJ4 401 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-209ENST00000473470 FBRSQ9HAH7 460 aa7.5□□□□□ -1.21
CNOT4-209ENST00000473470 PRDM5Q9NQX1 630 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-209ENST00000473470 GNAT3A8MTJ3 354 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 F6X3S4 739 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 SCAMP3O14828 347 aaKnown RBP7.49□□□□□ -1.21
CNOT4-209ENST00000473470 CST3P01034 146 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-209ENST00000473470 HOXA10P31260 410 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-209ENST00000473470 EIF4A3P38919 411 aaKnown RBP7.49□□□□□ -1.21
CNOT4-209ENST00000473470 CDK8P49336 464 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 FANCCQ00597 558 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 FAM160A1Q05DH4 1040 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 MLECQ14165 292 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 SLBPQ14493 270 aaKnown RBP eCLIP7.49□□□□□ -1.21
CNOT4-209ENST00000473470 IFI16Q16666 785 aaKnown RBP7.49□□□□□ -1.21
CNOT4-209ENST00000473470 SLC6A19Q695T7 634 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 UBE3DQ7Z6J8 389 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 SHISA5Q8N114 240 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 NETO1Q8TDF5 533 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 FBXL18Q96ME1 805 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms