RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 PI4KBQ9UBF8 816 aa18.92■□□□□ 0.62
MRPL55-226ENST00000473066 KCNH4Q9UQ05 1017 aa18.92■□□□□ 0.62
MRPL55-226ENST00000473066 FAM196BA6NMK8 535 aa18.91■□□□□ 0.62
MRPL55-226ENST00000473066 FAM43AQ8N2R8 423 aa18.91■□□□□ 0.62
MRPL55-226ENST00000473066 BOLA2Q9H3K6 86 aa18.91■□□□□ 0.62
MRPL55-226ENST00000473066 PAG1Q9NWQ8 432 aa18.91■□□□□ 0.62
MRPL55-226ENST00000473066 BTBD19C9JJ37 291 aa18.9■□□□□ 0.62
MRPL55-226ENST00000473066 CXCL11O14625 94 aa18.9■□□□□ 0.62
MRPL55-226ENST00000473066 SMARCA5O60264 1052 aaPredicted RBP18.9■□□□□ 0.62
MRPL55-226ENST00000473066 PDE6AP16499 860 aa18.9■□□□□ 0.62
MRPL55-226ENST00000473066 ATP5JP18859 108 aa18.9■□□□□ 0.62
MRPL55-226ENST00000473066 SLC9C2Q5TAH2 1124 aa18.9■□□□□ 0.62
MRPL55-226ENST00000473066 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.9■□□□□ 0.62
MRPL55-226ENST00000473066 DCTPP1Q9H773 170 aa18.9■□□□□ 0.62
MRPL55-226ENST00000473066 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
MRPL55-226ENST00000473066 ZHX2Q9Y6X8 837 aa18.9■□□□□ 0.62
MRPL55-226ENST00000473066 DDX60LQ5H9U9 1706 aaKnown RBP18.9■□□□□ 0.62
MRPL55-226ENST00000473066 MAGEB6P1A0A0J9YX57 407 aa18.89■□□□□ 0.61
MRPL55-226ENST00000473066 PTPRAP18433 802 aa18.89■□□□□ 0.61
MRPL55-226ENST00000473066 SP3Q02447 781 aa18.89■□□□□ 0.61
MRPL55-226ENST00000473066 ARHGEF6Q15052 776 aa18.89■□□□□ 0.61
MRPL55-226ENST00000473066 ANKRD23Q86SG2 305 aa18.89■□□□□ 0.61
MRPL55-226ENST00000473066 CRBNQ96SW2 442 aa18.89■□□□□ 0.61
MRPL55-226ENST00000473066 SAP30BPQ9UHR5 308 aaKnown RBP18.89■□□□□ 0.61
MRPL55-226ENST00000473066 SLURP2P0DP57 97 aa18.88■□□□□ 0.61
MRPL55-226ENST00000473066 GADL1Q6ZQY3 521 aa18.88■□□□□ 0.61
MRPL55-226ENST00000473066 FASTKD5Q7L8L6 764 aaKnown RBP18.88■□□□□ 0.61
MRPL55-226ENST00000473066 CD99L2Q8TCZ2 262 aa18.88■□□□□ 0.61
MRPL55-226ENST00000473066 HAUS7Q99871 368 aa18.88■□□□□ 0.61
MRPL55-226ENST00000473066 TBC1D2Q9BYX2 928 aa18.88■□□□□ 0.61
MRPL55-226ENST00000473066 CRNKL1Q9BZJ0 848 aaKnown RBP18.88■□□□□ 0.61
MRPL55-226ENST00000473066 TRIM17Q9Y577 477 aa18.88■□□□□ 0.61
MRPL55-226ENST00000473066 LOC285556D6RIA3 1793 aa18.88■□□□□ 0.61
MRPL55-226ENST00000473066 FBXO46Q6PJ61 603 aaPredicted RBP18.87■□□□□ 0.61
MRPL55-226ENST00000473066 FOXP4Q8IVH2 680 aaPredicted RBP18.87■□□□□ 0.61
MRPL55-226ENST00000473066 PARK7Q99497 189 aaKnown RBP18.87■□□□□ 0.61
MRPL55-226ENST00000473066 AS3MTQ9HBK9 375 aa18.87■□□□□ 0.61
MRPL55-226ENST00000473066 ZNF532Q9HCE3 1301 aa18.87■□□□□ 0.61
MRPL55-226ENST00000473066 ECHDC1Q9NTX5 307 aa18.87■□□□□ 0.61
MRPL55-226ENST00000473066 BAZ2AQ9UIF9 1905 aaKnown RBP18.87■□□□□ 0.61
MRPL55-226ENST00000473066 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
MRPL55-226ENST00000473066 TRIM75PA6NK02 468 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 PDHXO00330 501 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 TLR2O60603 784 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 CAP2P40123 477 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 KIF22Q14807 665 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 SLC4A8Q2Y0W8 1093 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 ZSCAN25Q6NSZ9 544 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 EDC3Q96F86 508 aaKnown RBP18.86■□□□□ 0.61
MRPL55-226ENST00000473066 PCDHB15Q9Y5E8 787 aa18.86■□□□□ 0.61
MRPL55-226ENST00000473066 A0A0G2JLL6 359 aaPredicted RBP18.85■□□□□ 0.61
MRPL55-226ENST00000473066 ASNSP08243 561 aa18.85■□□□□ 0.61
MRPL55-226ENST00000473066 PRRT2Q7Z6L0 340 aaPredicted RBP18.85■□□□□ 0.61
MRPL55-226ENST00000473066 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
MRPL55-226ENST00000473066 EFCC1Q9HA90 598 aa18.85■□□□□ 0.61
MRPL55-226ENST00000473066 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
MRPL55-226ENST00000473066 MGAMO43451 1857 aa18.85■□□□□ 0.61
MRPL55-226ENST00000473066 ZSWIM8A7E2V4 1837 aa18.84■□□□□ 0.61
MRPL55-226ENST00000473066 USP17L5A8MUK1 530 aa18.84■□□□□ 0.61
MRPL55-226ENST00000473066 OTOP1Q7RTM1 612 aa18.84■□□□□ 0.61
MRPL55-226ENST00000473066 CCDC84Q86UT8 332 aaPredicted RBP18.84■□□□□ 0.61
MRPL55-226ENST00000473066 RIOK1Q9BRS2 568 aaKnown RBP18.84■□□□□ 0.61
MRPL55-226ENST00000473066 GINM1Q9NU53 330 aa18.84■□□□□ 0.61
MRPL55-226ENST00000473066 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.84■□□□□ 0.61
MRPL55-226ENST00000473066 HPS5Q9UPZ3 1129 aa18.84■□□□□ 0.61
MRPL55-226ENST00000473066 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.6
MRPL55-226ENST00000473066 ADD2P35612 726 aa18.83■□□□□ 0.6
MRPL55-226ENST00000473066 AAMPQ13685 434 aa18.83■□□□□ 0.6
MRPL55-226ENST00000473066 ZNF280CQ8ND82 737 aa18.83■□□□□ 0.6
MRPL55-226ENST00000473066 SERPINB13Q9UIV8 391 aa18.83■□□□□ 0.6
MRPL55-226ENST00000473066 TCRBV5S4A2TA0A5A2 114 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 ERC2O15083 957 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 MBD4O95243 580 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 AMOTL1Q8IY63 956 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 EHD4Q9H223 541 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 DNAJC18Q9H819 358 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 PNMA3Q9UL41 463 aa18.82■□□□□ 0.6
MRPL55-226ENST00000473066 GDF11O95390 407 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 SPP2Q13103 211 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.69e-7■■■■□ 25.1
MRPL55-226ENST00000473066 MOGSQ13724 837 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 UBE3CQ15386 1083 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 METTL16Q86W50 562 aaKnown RBP18.81■□□□□ 0.6
MRPL55-226ENST00000473066 LCORLQ8N3X6 602 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 PROCA1Q8NCQ7 364 aaPredicted RBP18.81■□□□□ 0.6
MRPL55-226ENST00000473066 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
MRPL55-226ENST00000473066 ARMT1Q9H993 441 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 MCM9Q9NXL9 1143 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 CPA4Q9UI42 421 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 ZBTB21Q9ULJ3 1066 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 SLC45A1Q9Y2W3 748 aa18.81■□□□□ 0.6
MRPL55-226ENST00000473066 TTC41PQ6P2S7 1318 aa18.8■□□□□ 0.6
MRPL55-226ENST00000473066 LRRFIP1Q32MZ4 808 aaKnown RBP18.8■□□□□ 0.6
MRPL55-226ENST00000473066 GPAT2Q6NUI2 795 aa18.8■□□□□ 0.6
MRPL55-226ENST00000473066 GCC1Q96CN9 775 aa18.8■□□□□ 0.6
MRPL55-226ENST00000473066 AGTPBP1Q9UPW5 1226 aa18.8■□□□□ 0.6
MRPL55-226ENST00000473066 HMGCS2P54868 508 aa18.79■□□□□ 0.6
MRPL55-226ENST00000473066 LACTBP83111 547 aaPredicted RBP18.79■□□□□ 0.6
MRPL55-226ENST00000473066 RRP1BQ14684 758 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms