RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RRP1BQ14684 758 aaKnown RBP15.86■□□□□ 0.13
TPM3-216ENST00000473036 OSBP2Q969R2 916 aa15.86■□□□□ 0.13
TPM3-216ENST00000473036 ZNF112Q9UJU3 913 aa15.86■□□□□ 0.13
TPM3-216ENST00000473036 NAV1Q8NEY1 1877 aa15.86■□□□□ 0.13
TPM3-216ENST00000473036 BAZ2AQ9UIF9 1905 aaKnown RBP15.86■□□□□ 0.13
TPM3-216ENST00000473036 SMIM22K7EJ46 135 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 M0R2C6 588 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 RNF113AO15541 343 aaKnown RBP15.85■□□□□ 0.13
TPM3-216ENST00000473036 MBD4O95243 580 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 INPP5BP32019 993 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 VGLL4Q14135 290 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 TMED8Q6PL24 325 aaPredicted RBP15.85■□□□□ 0.13
TPM3-216ENST00000473036 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 ZKSCAN4Q969J2 545 aaPredicted RBP15.85■□□□□ 0.13
TPM3-216ENST00000473036 SEC62Q99442 399 aaKnown RBP15.85■□□□□ 0.13
TPM3-216ENST00000473036 DNAJC18Q9H819 358 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
TPM3-216ENST00000473036 SAP30BPQ9UHR5 308 aaKnown RBP15.85■□□□□ 0.13
TPM3-216ENST00000473036 PALD1Q9ULE6 856 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 LAMB1P07942 1786 aa15.85■□□□□ 0.13
TPM3-216ENST00000473036 MANSC4A6NHS7 340 aaPredicted RBP15.84■□□□□ 0.13
TPM3-216ENST00000473036 PLCG2P16885 1265 aa15.84■□□□□ 0.13
TPM3-216ENST00000473036 MAP3K9P80192 1104 aa15.84■□□□□ 0.13
TPM3-216ENST00000473036 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
TPM3-216ENST00000473036 SLC4A8Q2Y0W8 1093 aa15.84■□□□□ 0.13
TPM3-216ENST00000473036 NOL10Q9BSC4 688 aaKnown RBP15.84■□□□□ 0.13
TPM3-216ENST00000473036 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.84■□□□□ 0.13
TPM3-216ENST00000473036 ZBTB47Q9UFB7 747 aaPredicted RBP15.84■□□□□ 0.13
TPM3-216ENST00000473036 SNCAIPQ9Y6H5 919 aa15.84■□□□□ 0.13
TPM3-216ENST00000473036 HTTP42858 3142 aa15.83■□□□□ 0.12
TPM3-216ENST00000473036 ZBTB48P10074 688 aaPredicted RBP15.83■□□□□ 0.12
TPM3-216ENST00000473036 IREB2P48200 963 aaKnown RBP15.83■□□□□ 0.12
TPM3-216ENST00000473036 SPRYD7Q5W111 196 aa15.83■□□□□ 0.12
TPM3-216ENST00000473036 METTL16Q86W50 562 aaKnown RBP15.83■□□□□ 0.12
TPM3-216ENST00000473036 ZSCAN29Q8IWY8 852 aaPredicted RBP15.83■□□□□ 0.12
TPM3-216ENST00000473036 WRNIP1Q96S55 665 aa15.83■□□□□ 0.12
TPM3-216ENST00000473036 ZNF341Q9BYN7 854 aa15.83■□□□□ 0.12
TPM3-216ENST00000473036 ELP3Q9H9T3 547 aa15.83■□□□□ 0.12
TPM3-216ENST00000473036 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.83■□□□□ 0.12
TPM3-216ENST00000473036 PHIPQ8WWQ0 1821 aa15.82■□□□□ 0.12
TPM3-216ENST00000473036 GSPT1P15170 499 aaKnown RBP15.82■□□□□ 0.12
TPM3-216ENST00000473036 PLCD1P51178 756 aa15.82■□□□□ 0.12
TPM3-216ENST00000473036 JAG1P78504 1218 aa15.82■□□□□ 0.12
TPM3-216ENST00000473036 SHROOM1Q2M3G4 852 aaPredicted RBP15.82■□□□□ 0.12
TPM3-216ENST00000473036 ZMYM1Q5SVZ6 1142 aa15.82■□□□□ 0.12
TPM3-216ENST00000473036 ANKRD13AQ8IZ07 590 aa15.82■□□□□ 0.12
TPM3-216ENST00000473036 WNK4Q96J92 1243 aa15.82■□□□□ 0.12
TPM3-216ENST00000473036 STRBPQ96SI9 672 aaKnown RBP15.82■□□□□ 0.12
TPM3-216ENST00000473036 FSD1Q9BTV5 496 aa15.82■□□□□ 0.12
TPM3-216ENST00000473036 DCP1AQ9NPI6 582 aaPredicted RBP15.82■□□□□ 0.12
TPM3-216ENST00000473036 FOXP2O15409 715 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 TBC1D12O60347 775 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 CYP2D6P10635 497 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 USP5P45974 858 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 DCAF15Q66K64 600 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 ZSCAN25Q6NSZ9 544 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 APPBP2Q92624 585 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 EVI5LQ96CN4 794 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 SLC10A4Q96EP9 437 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 ATAD5Q96QE3 1844 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 PPP4R2Q9NY27 417 aa15.81■□□□□ 0.12
TPM3-216ENST00000473036 DOCK1Q14185 1865 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 CENPFP49454 3210 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 CYP2D7A0A087X1C5 515 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 OTUD7BQ6GQQ9 843 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 CCDC129Q6ZRS4 1044 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 CERS3Q8IU89 383 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 OPTNQ96CV9 577 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 FAM227BQ96M60 508 aa15.8■□□□□ 0.12
TPM3-216ENST00000473036 CRNKL1Q9BZJ0 848 aaKnown RBP15.8■□□□□ 0.12
TPM3-216ENST00000473036 MKI67P46013 3256 aaKnown RBP15.79■□□□□ 0.12
TPM3-216ENST00000473036 GSG1L2A8MUP6 293 aa15.79■□□□□ 0.12
TPM3-216ENST00000473036 GPAA1O43292 621 aa15.79■□□□□ 0.12
TPM3-216ENST00000473036 ZFYP08048 801 aaPredicted RBP15.79■□□□□ 0.12
TPM3-216ENST00000473036 NOL9Q5SY16 702 aaKnown RBP15.79■□□□□ 0.12
TPM3-216ENST00000473036 CENPQQ7L2Z9 268 aaPredicted RBP15.79■□□□□ 0.12
TPM3-216ENST00000473036 CCDC84Q86UT8 332 aaPredicted RBP15.79■□□□□ 0.12
TPM3-216ENST00000473036 IFNL1Q8IU54 200 aa15.79■□□□□ 0.12
TPM3-216ENST00000473036 HOOK2Q96ED9 719 aa15.79■□□□□ 0.12
TPM3-216ENST00000473036 ERO1AQ96HE7 468 aa15.79■□□□□ 0.12
TPM3-216ENST00000473036 EPB41L4AQ9HCS5 686 aaPredicted RBP15.79■□□□□ 0.12
TPM3-216ENST00000473036 PI4KBQ9UBF8 816 aa15.79■□□□□ 0.12
TPM3-216ENST00000473036 A0A0D9SFI3 127 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 SPDYE5A6NIY4 337 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 TRIM6-TRIM34B2RNG4 842 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 GABPAQ06546 454 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 TTC22Q5TAA0 569 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 MS4A4AQ96JQ5 239 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 DHX36Q9H2U1 1008 aaKnown RBP15.78■□□□□ 0.12
TPM3-216ENST00000473036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.78■□□□□ 0.12
TPM3-216ENST00000473036 SLC4A4Q9Y6R1 1079 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 PTPRFP10586 1907 aa15.78■□□□□ 0.12
TPM3-216ENST00000473036 VPS53Q5VIR6 699 aa15.77■□□□□ 0.12
TPM3-216ENST00000473036 OTOP1Q7RTM1 612 aa15.77■□□□□ 0.12
TPM3-216ENST00000473036 RILPL2Q969X0 211 aa15.77■□□□□ 0.12
TPM3-216ENST00000473036 PTPN18Q99952 460 aa15.77■□□□□ 0.12
TPM3-216ENST00000473036 MCM9Q9NXL9 1143 aa15.77■□□□□ 0.12
TPM3-216ENST00000473036 CSADQ9Y600 493 aa15.77■□□□□ 0.12
TPM3-216ENST00000473036 RBBP6Q7Z6E9 1792 aaKnown RBP15.77■□□□□ 0.11
TPM3-216ENST00000473036 IRF6O14896 467 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms