RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	GADL1	Q6ZQY3	521 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	AACS	Q86V21	672 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	TRIM34	Q9BYJ4	488 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	ARHGAP39	Q9C0H5	1083 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	DHX36	Q9H2U1	1008 aa	Known RBP	10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	HERC5	Q9UII4	1024 aa	Known RBP	10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	DDX19B	Q9UMR2	479 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	EXOC6B	Q9Y2D4	811 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	AFG3L2	Q9Y4W6	797 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	PTCH2	Q9Y6C5	1203 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	ZSWIM8	A7E2V4	1837 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	FOCAD	Q5VW36	1801 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	PHIP	Q8WWQ0	1821 aa		10.9	□□□□□ -0.66
CHEK2-223	ENST00000472807	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	ATAD5	Q96QE3	1844 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	FAM196B	A6NMK8	535 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	HMMR	O75330	724 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	SLURP2	P0DP57	97 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	CYP2C8	P10632	490 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	PRMT2	P55345	433 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	GPAT2	Q6NUI2	795 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	CERS3	Q8IU89	383 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	EAF2	Q96CJ1	260 aa	Predicted RBP	10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	ZNF333	Q96JL9	665 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	TMEM106C	Q9BVX2	250 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	TBC1D2	Q9BYX2	928 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	CHMP4B	Q9H444	224 aa	Known RBP	10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	PIH1D3	Q9NQM4	214 aa	Known RBP	10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	FOXD4L1	Q9NU39	408 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	SLC45A1	Q9Y2W3	748 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	CDK5RAP2	Q96SN8	1893 aa		10.89	□□□□□ -0.67
CHEK2-223	ENST00000472807	FLT1	P17948	1338 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	POTEF	A5A3E0	1075 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	IDH1	O75874	414 aa	Known RBP	10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	ECM2	O94769	699 aa	Predicted RBP	10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	FMNL1	O95466	1100 aa	Predicted RBP	10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	CYP7A1	P22680	504 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	HOXD10	P28358	340 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	PSMC4	P43686	418 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	PPP4C	P60510	307 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	TMED8	Q6PL24	325 aa	Predicted RBP	10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	ADGRA1	Q86SQ6	560 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	MAPKAPK5	Q8IW41	473 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	TGFBRAP1	Q8WUH2	860 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	PI4KB	Q9UBF8	816 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	RCAN3	Q9UKA8	241 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	PNMA3	Q9UL41	463 aa		10.88	□□□□□ -0.67
CHEK2-223	ENST00000472807	SIPA1L1	O43166	1804 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	HLA-DOA	P06340	250 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	BCR	P11274	1271 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	CAP2	P40123	477 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	FCGRT	P55899	365 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	MAP3K12	Q12852	859 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	SLC4A8	Q2Y0W8	1093 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	PRPF38B	Q5VTL8	546 aa	Known RBP	10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	CCDC84	Q86UT8	332 aa	Predicted RBP	10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	CLASRP	Q8N2M8	674 aa	Known RBP	10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	MAGEB6	Q8N7X4	407 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	ZNF280C	Q8ND82	737 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	RHPN1	Q8TCX5	695 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	RAET1E	Q8TD07	263 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	TRIM47	Q96LD4	638 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	SRRD	Q9UH36	339 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	AGTPBP1	Q9UPW5	1226 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	COG6	Q9Y2V7	657 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	LOC285556	D6RIA3	1793 aa		10.87	□□□□□ -0.67
CHEK2-223	ENST00000472807	MYPN	Q86TC9	1320 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	USP17L5	A8MUK1	530 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	APBB1	O00213	710 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	IFIT2	P09913	472 aa	Known RBP	10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	OSBP	P22059	807 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	SPP2	Q13103	211 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.86	□□□□□ -0.67	7e-6	■□□□□ 8.5
CHEK2-223	ENST00000472807	MIGA1	Q8NAN2	632 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	SH3TC2	Q8TF17	1288 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	KIF1BP	Q96EK5	621 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	AS3MT	Q9HBK9	375 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	IL1RAPL2	Q9NP60	686 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	ZBTB40	Q9NUA8	1239 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	PALD1	Q9ULE6	856 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	NDUFB9	Q9Y6M9	179 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	MGAM	O43451	1857 aa		10.86	□□□□□ -0.67
CHEK2-223	ENST00000472807	CEP290	O15078	2479 aa		10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	MYC	P01106	439 aa	Predicted RBP	10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	ASNS	P08243	561 aa		10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	CTGF	P29279	349 aa		10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	USP5	P45974	858 aa		10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	HMGCS2	P54868	508 aa		10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	DYNLL1	P63167	89 aa	Known RBP	10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	TTF1	Q15361	905 aa	Predicted RBP	10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	TREML2	Q5T2D2	321 aa		10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	SAP30BP	Q9UHR5	308 aa	Known RBP	10.85	□□□□□ -0.67
CHEK2-223	ENST00000472807	MYH1	P12882	1939 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms