RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 SLC10A4Q96EP9 437 aa12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 WRNIP1Q96S55 665 aa12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 DHX36Q9H2U1 1008 aaKnown RBP12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 CSADQ9Y600 493 aa12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 FAM196BA6NMK8 535 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 GPAA1O43292 621 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 EPB41L2O43491 1005 aaKnown RBP12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 SLURP2P0DP57 97 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 MAP3K9P80192 1104 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 ZMYM1Q5SVZ6 1142 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 KIAA1211Q6ZU35 1233 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 AMOTL1Q8IY63 956 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 ANKRD13AQ8IZ07 590 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 CLMNQ96JQ2 1002 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 ELP3Q9H9T3 547 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 PI4KBQ9UBF8 816 aa12.62□□□□□ -0.39
SMARCD3-208ENST00000472789 CASP8AP2Q9UKL3 1982 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 ATRNL1Q5VV63 1379 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 MAP2K2P36507 400 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 MFAP1P55081 439 aaKnown RBP12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 NMIQ13287 307 aaPredicted RBP12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 MAP3K11Q16584 847 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 TTC6Q86TZ1 520 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 ZKSCAN4Q969J2 545 aaPredicted RBP12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 HHIPL1Q96JK4 782 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 FAM227BQ96M60 508 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 STRBPQ96SI9 672 aaKnown RBP12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
SMARCD3-208ENST00000472789 A0A0D9SFI3 127 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 GNAT2P19087 354 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 MCCP23508 829 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 INPP5BP32019 993 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 TDO2P48775 406 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 VGLL4Q14135 290 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 CWC27Q6UX04 472 aaKnown RBP12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 RASAL3Q86YV0 1011 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 ATP8A2Q9NTI2 1148 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 RAD50Q92878 1312 aa12.6□□□□□ -0.39
SMARCD3-208ENST00000472789 COL2A1P02458 1487 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 SLC10A3P09131 477 aa12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 CYP2D6P10635 497 aa12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 FOXP4Q8IVH2 680 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 ESYT1Q9BSJ8 1104 aa12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 MCOLN1Q9GZU1 580 aa12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 HERC5Q9UII4 1024 aaKnown RBP12.59□□□□□ -0.39
SMARCD3-208ENST00000472789 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 GSG1L2A8MUP6 293 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 MINDY4BA8MYZ0 360 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 USP17L12C9JPN9 530 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 USP17L21D6R901 530 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 TBC1D12O60347 775 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 PLCD1P51178 756 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 NOGQ13253 232 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 STK11IPQ8N1F8 1099 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 WNK4Q96J92 1243 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 CDK5RAP2Q96SN8 1893 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 NAPBQ9H115 298 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 SERPINB13Q9UIV8 391 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 MYH1P12882 1939 aa12.58□□□□□ -0.4
SMARCD3-208ENST00000472789 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 UNCXA6NJT0 531 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 PHF20L1A8MW92 1017 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 PATL2C9JE40 543 aaKnown RBP12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 SGSM2O43147 1006 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 CA12O43570 354 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 ANP32AP39687 249 aaKnown RBP12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 KIF23Q02241 960 aaPredicted RBP12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 SPRYD7Q5W111 196 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 OPTNQ96CV9 577 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 DYNLL2Q96FJ2 89 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 ZIC5Q96T25 663 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 ANO2Q9NQ90 1003 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 ARPP21Q9UBL0 812 aaPredicted RBP12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 ZNF112Q9UJU3 913 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
SMARCD3-208ENST00000472789 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 FAM155AB1AL88 458 aaPredicted RBP12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 CTNND1O60716 968 aaKnown RBP12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 GDF11O95390 407 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 EVX2Q03828 476 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms