RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 MLECQ14165 292 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 CCDC81Q6ZN84 652 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 RNF214Q8ND24 703 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 UBXN4Q92575 508 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 DHX38Q92620 1227 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 EHMT1Q9H9B1 1298 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 STK10O94804 968 aaKnown RBP7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 HTR3BO95264 441 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 PGRP06401 933 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 USP11P51784 963 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 EIF6P56537 245 aaKnown RBP7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 RING1Q06587 406 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 ADGRE1Q14246 886 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 TTLL4Q14679 1199 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 MBTPS1Q14703 1052 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 ZBTB37Q5TC79 503 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 CDC37L1Q7L3B6 337 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 ZNF507Q8TCN5 953 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 SSU72Q9NP77 194 aaKnown RBP7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 ACTL7BQ9Y614 415 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 MRVI1Q9Y6F6 885 aa7.53□□□□□ -1.2
PRPF40A-208ENST00000472760 PRR36Q9H6K5 1346 aa7.52□□□□□ -1.2
PRPF40A-208ENST00000472760 ATE1O95260 518 aa7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 HCLS1P14317 486 aaPredicted RBP7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 PREPP48147 710 aa7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 TXNRD3Q86VQ6 643 aa7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 C2CD4AQ8NCU7 369 aaPredicted RBP7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 ARMC5Q96C12 935 aa7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 ANAPC16Q96DE5 110 aa7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 REV1Q9UBZ9 1251 aa7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 ZNRF3Q9ULT6 936 aa7.52□□□□□ -1.21
PRPF40A-208ENST00000472760 LRRFIP1Q32MZ4 808 aaKnown RBP7.51□□□□□ -1.21
PRPF40A-208ENST00000472760 Q6ZS46 218 aa7.51□□□□□ -1.21
PRPF40A-208ENST00000472760 KCT2Q8NC54 265 aa7.51□□□□□ -1.21
PRPF40A-208ENST00000472760 UBL7Q96S82 380 aaPredicted RBP7.51□□□□□ -1.21
PRPF40A-208ENST00000472760 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
PRPF40A-208ENST00000472760 ADAM30Q9UKF2 790 aa7.51□□□□□ -1.21
PRPF40A-208ENST00000472760 KRBA1A5PL33 1030 aa7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 RAB6AP20340 208 aa7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 HID1Q8IV36 788 aa7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 SMYD4Q8IYR2 804 aaPredicted RBP7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 FAM46AQ96IP4 442 aaKnown RBP7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 SHDQ96IW2 340 aa7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 HIRIP3Q9BW71 556 aaPredicted RBP7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 YIPF2Q9BWQ6 316 aa7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 GSX1Q9H4S2 264 aaPredicted RBP7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 ZNF408Q9H9D4 720 aa7.5□□□□□ -1.21
PRPF40A-208ENST00000472760 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 NEFMP07197 916 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 ETFBP38117 255 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 GIPRP48546 466 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 UVSSAQ2YD98 709 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 TMEM201Q5SNT2 666 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 OR6P1Q8NGX9 317 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 UTP4Q969X6 686 aaKnown RBP7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 ISL2Q96A47 359 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 DNAJC2Q99543 621 aaKnown RBP7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 KLHL3Q9UH77 587 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
PRPF40A-208ENST00000472760 RXRBP28702 533 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 NTF4P34130 210 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 CHRNA4P43681 627 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 CD163Q86VB7 1156 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 CKAP2LQ8IYA6 745 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 DZIP1LQ8IYY4 767 aaKnown RBP7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 RBBP8NLQ8NC74 664 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 FAM13CQ8NE31 585 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 ACSF2Q96CM8 615 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 MEGF10Q96KG7 1140 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 ANTXR1Q9H6X2 564 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 GMIPQ9P107 970 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 TJP2Q9UDY2 1190 aa7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 R3HCC1Q9Y3T6 440 aaKnown RBP7.48□□□□□ -1.21
PRPF40A-208ENST00000472760 SLC22A31A6NKX4 558 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 C1QTNF9BB2RNN3 333 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 BMP3P12645 472 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 YARSP54577 528 aaKnown RBP7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 RBL2Q08999 1139 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 SGO2Q562F6 1265 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 SOGA3Q5TF21 947 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 SLC6A19Q695T7 634 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 LSRQ86X29 649 aaPredicted RBP7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 MCATQ8IVS2 390 aaKnown RBP7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 FBLIM1Q8WUP2 373 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 TMEM40Q8WWA1 233 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 TMEM87BQ96K49 555 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 ACSS3Q9H6R3 686 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 FBRSQ9HAH7 460 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 PRKAG3Q9UGI9 489 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 DAGLAQ9Y4D2 1042 aa7.47□□□□□ -1.21
PRPF40A-208ENST00000472760 MEIS3P2A8K0S8 358 aa7.46□□□□□ -1.22
PRPF40A-208ENST00000472760 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.22
PRPF40A-208ENST00000472760 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.22
PRPF40A-208ENST00000472760 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.22
PRPF40A-208ENST00000472760 NFICP08651 508 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms