RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MS4A5Q9H3V2 200 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 ANLNQ9NQW6 1124 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 GNL3LQ9NVN8 582 aaKnown RBP3.52□□□□□ -1.85
XRN1-210ENST00000472697 TRHDEQ9UKU6 1024 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 ZBTB21Q9ULJ3 1066 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 STRIP2Q9ULQ0 834 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 RSF1Q96T23 1441 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 FAM181BA6NEQ2 426 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 NEMP1O14524 444 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 DNAJC8O75937 253 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 ITPKAP23677 461 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 NEK2P51955 445 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 LMOD3Q0VAK6 560 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 SETDB1Q15047 1291 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 ABHD17CQ6PCB6 329 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 UNC5AQ6ZN44 842 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 PPFIBP1Q86W92 1011 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 COL23A1Q86Y22 540 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 KISS1RQ969F8 398 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 NXPE3Q969Y0 559 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 GAS2L1Q99501 681 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 APBA2Q99767 749 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 LACRTQ9GZZ8 138 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 SH2B1Q9NRF2 756 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 TERF2IPQ9NYB0 399 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 KLHL3Q9UH77 587 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 IP6K2Q9UHH9 426 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 FNDC3AQ9Y2H6 1198 aaKnown RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 TRAF6Q9Y4K3 522 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 RPS6KL1Q9Y6S9 549 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 LCHNA4D1U4 455 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 ZNF891A8MT65 544 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 M0R2C6 588 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 HTR3BO95264 441 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 MYL3P08590 195 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 EDN3P14138 238 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 RAG1P15918 1043 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 CD33P20138 364 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 PWP1Q13610 501 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 STAT4Q14765 748 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 PRSS53Q2L4Q9 553 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 VN1R5Q7Z5H4 357 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 ZBTB38Q8NAP3 1195 aaPredicted RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 BHMTQ93088 406 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 FGD4Q96M96 766 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 CEP89Q96ST8 783 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 NAGPAQ9UK23 515 aa3.51□□□□□ -1.85
XRN1-210ENST00000472697 MRPS23Q9Y3D9 190 aaKnown RBP3.51□□□□□ -1.85
XRN1-210ENST00000472697 A0A1W2PQU0 124 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 DLL1O00548 723 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 WNT7AO00755 349 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 KHNYNO15037 678 aaKnown RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 SUSD5O60279 629 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 RASGRP1O95267 797 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 TUBB8Q3ZCM7 444 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 CCDC184Q52MB2 194 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 TNNI3KQ59H18 835 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 GNASQ5JWF2 1037 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 DCAF15Q66K64 600 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 SV2BQ7L1I2 683 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 PDZD3Q86UT5 571 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 LINC00528Q8N1L1 170 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 PLPPR2Q96GM1 343 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 SPATA9Q9BWV2 254 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 MAF1Q9H063 256 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 CDH19Q9H159 772 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 CAAP1Q9H8G2 361 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 SLC52A2Q9HAB3 445 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 PDZRN3Q9UPQ7 1066 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 LAS1LQ9Y4W2 734 aaKnown RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 CHURC1-FNTBB4DL54 471 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 APAF1O14727 1248 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 WDHD1O75717 1129 aaPredicted RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 KIF4AO95239 1232 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 EPHX1P07099 455 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 CASP7P55210 303 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 PPP2R2AP63151 447 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 TBC1D8BQ0IIM8 1120 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 UBAP2LQ14157 1087 aaKnown RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 TAF7LQ5H9L4 462 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 SPTY2D1Q68D10 685 aaPredicted RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 ERAP2Q6P179 960 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 LRP10Q7Z4F1 713 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 UBE3DQ7Z6J8 389 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 NXPE1Q8N323 547 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 CNTD1Q8N815 330 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 USP33Q8TEY7 942 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 PPP1R14AQ96A00 147 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 LRRC3Q9BY71 257 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 AASDHPPTQ9NRN7 309 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 TYW1Q9NV66 732 aaKnown RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 MAGEC2Q9UBF1 373 aaPredicted RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 TNPO3Q9Y5L0 923 aaKnown RBP3.5□□□□□ -1.85
XRN1-210ENST00000472697 WASF2Q9Y6W5 498 aa3.5□□□□□ -1.85
XRN1-210ENST00000472697 ATAD2BQ9ULI0 1458 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 PHF20L1A8MW92 1017 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 EGFRP00533 1210 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 C6orf222P0C671 652 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 TATP17735 454 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 GUCY2CP25092 1073 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms