RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 ZNF654Q8IZM8 581 aa17.42■□□□□ 0.38
UBXN11-213ENST00000472155 KLHL34Q8N239 644 aa17.42■□□□□ 0.38
UBXN11-213ENST00000472155 AOPEPQ8N6M6 819 aa17.42■□□□□ 0.38
UBXN11-213ENST00000472155 NSUN4Q96CB9 384 aaKnown RBP17.42■□□□□ 0.38
UBXN11-213ENST00000472155 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
UBXN11-213ENST00000472155 IFNAR1P17181 557 aa17.42■□□□□ 0.38
UBXN11-213ENST00000472155 U2AF2P26368 475 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBXN11-213ENST00000472155 TOB1P50616 345 aaPredicted RBP17.42■□□□□ 0.38
UBXN11-213ENST00000472155 SEC23AQ15436 765 aa17.42■□□□□ 0.38
UBXN11-213ENST00000472155 CPLX2Q6PUV4 134 aaKnown RBP17.42■□□□□ 0.38
UBXN11-213ENST00000472155 FAM205CA6NFA0 338 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 USP17L21D6R901 530 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 CTR9Q6PD62 1173 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
UBXN11-213ENST00000472155 ENAHQ8N8S7 591 aaPredicted RBP17.41■□□□□ 0.38
UBXN11-213ENST00000472155 CTAGE5O15320 804 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 GRIK5Q16478 980 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 CRACR2BQ8N4Y2 399 aaPredicted RBP17.41■□□□□ 0.38
UBXN11-213ENST00000472155 KIAA1524Q8TCG1 905 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 KIAA1468Q9P260 1216 aa17.41■□□□□ 0.38
UBXN11-213ENST00000472155 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
UBXN11-213ENST00000472155 ATP2B1P20020 1258 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 NFIXQ14938 502 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 DIS3L2Q8IYB7 885 aaKnown RBP17.4■□□□□ 0.38
UBXN11-213ENST00000472155 FANCBQ8NB91 859 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 UBAC1Q9BSL1 405 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 LRRC4BQ9NT99 713 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 TNRC6CQ9HCJ0 1690 aaKnown RBP17.4■□□□□ 0.38
UBXN11-213ENST00000472155 PLEKHA8P1O95397 391 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 FAM47AQ5JRC9 791 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 DNTTIP2Q5QJE6 756 aaKnown RBP17.4■□□□□ 0.38
UBXN11-213ENST00000472155 TSC1Q92574 1164 aa17.4■□□□□ 0.38
UBXN11-213ENST00000472155 HIBADHP31937 336 aaKnown RBP17.39■□□□□ 0.37
UBXN11-213ENST00000472155 NOM1Q5C9Z4 860 aaKnown RBP17.39■□□□□ 0.37
UBXN11-213ENST00000472155 CLIP2Q9UDT6 1046 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 ERICH2A1L162 156 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 GOLGA6L19H0YKK7 550 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 NPHP1O15259 732 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 FOXN1O15353 648 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 CMA1P23946 247 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 TRIM29Q14134 588 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 EARS2Q5JPH6 523 aaKnown RBP17.39■□□□□ 0.37
UBXN11-213ENST00000472155 RC3H1Q5TC82 1133 aaKnown RBP17.39■□□□□ 0.37
UBXN11-213ENST00000472155 TPTE2Q6XPS3 522 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
UBXN11-213ENST00000472155 MMP1P03956 469 aa17.38■□□□□ 0.37
UBXN11-213ENST00000472155 SART3Q15020 963 aaKnown RBP17.38■□□□□ 0.37
UBXN11-213ENST00000472155 NOSTRINQ8IVI9 506 aa17.38■□□□□ 0.37
UBXN11-213ENST00000472155 CACTINQ8WUQ7 758 aaKnown RBP17.38■□□□□ 0.37
UBXN11-213ENST00000472155 ANO10Q9NW15 660 aa17.38■□□□□ 0.37
UBXN11-213ENST00000472155 RBM10P98175 930 aaKnown RBP17.38■□□□□ 0.37
UBXN11-213ENST00000472155 PNOCQ13519 176 aa17.38■□□□□ 0.37
UBXN11-213ENST00000472155 VPS54Q9P1Q0 977 aa17.38■□□□□ 0.37
UBXN11-213ENST00000472155 ANAPC4Q9UJX5 808 aa17.38■□□□□ 0.37
UBXN11-213ENST00000472155 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
UBXN11-213ENST00000472155 UQCRHLA0A096LP55 91 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 BECN2A8MW95 431 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 WNT7AO00755 349 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 UQCRHP07919 91 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
UBXN11-213ENST00000472155 VEGFAP15692 232 aaPredicted RBP17.37■□□□□ 0.37
UBXN11-213ENST00000472155 ESR2Q92731 530 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 ZSCAN10Q96SZ4 725 aaPredicted RBP17.37■□□□□ 0.37
UBXN11-213ENST00000472155 RNF41Q9H4P4 317 aaPredicted RBP17.37■□□□□ 0.37
UBXN11-213ENST00000472155 ZNF831Q5JPB2 1677 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 ADAMTS3O15072 1205 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 NYXQ9GZU5 481 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 DCP1AQ9NPI6 582 aaPredicted RBP17.37■□□□□ 0.37
UBXN11-213ENST00000472155 STK36Q9NRP7 1315 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 DUOX1Q9NRD9 1551 aa17.37■□□□□ 0.37
UBXN11-213ENST00000472155 SYKP43405 635 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 PKN1Q16512 942 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 FOXP4Q8IVH2 680 aaPredicted RBP17.36■□□□□ 0.37
UBXN11-213ENST00000472155 SPTLC3Q9NUV7 552 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 USP49Q70CQ1 688 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 NID2Q14112 1375 aa17.36■□□□□ 0.37
UBXN11-213ENST00000472155 RFC4P35249 363 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 FUT2Q10981 343 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 DIXDC1Q155Q3 683 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 USP17L8P0C7I0 530 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 TRIM22Q8IYM9 498 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 BRIP1Q9BX63 1249 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 ANKIB1Q9P2G1 1089 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 V9GY48 417 aaPredicted RBP17.35■□□□□ 0.37
UBXN11-213ENST00000472155 MYH6P13533 1939 aa17.35■□□□□ 0.37
UBXN11-213ENST00000472155 PTPN21Q16825 1174 aa17.34■□□□□ 0.37
UBXN11-213ENST00000472155 IFIT1BQ5T764 474 aaKnown RBP17.34■□□□□ 0.37
UBXN11-213ENST00000472155 RESP18Q5W5W9 173 aa17.34■□□□□ 0.37
UBXN11-213ENST00000472155 FILIP1Q7Z7B0 1213 aa17.34■□□□□ 0.37
UBXN11-213ENST00000472155 METTL16Q86W50 562 aaKnown RBP17.34■□□□□ 0.37
UBXN11-213ENST00000472155 CABP5Q9NP86 173 aa17.34■□□□□ 0.37
UBXN11-213ENST00000472155 TAF1LQ8IZX4 1826 aa17.34■□□□□ 0.37
UBXN11-213ENST00000472155 GOLGA6L6A8MZA4 724 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms