RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ZBTB37	Q5TC79	503 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	GK5	Q6ZS86	529 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	SHD	Q96IW2	340 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	FERD3L	Q96RJ6	166 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	USP35	Q9P2H5	1018 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	AP4E1	Q9UPM8	1137 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	CSAD	Q9Y600	493 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	ACTL7B	Q9Y614	415 aa		6.02	□□□□□ -1.45
PTCD3-209	ENST00000472044	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	KRBA1	A5PL33	1030 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	MEIS3P2	A8K0S8	358 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	SSB	P05455	408 aa	Known RBP eCLIP	6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	GRK4	P32298	578 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	CAP2	P40123	477 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	PREP	P48147	710 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	KCNMA1	Q12791	1236 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	TTLL4	Q14679	1199 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	DYM	Q7RTS9	669 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	TXNRD3	Q86VQ6	643 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	KCT2	Q8NC54	265 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	OR6P1	Q8NGX9	317 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	ZNF507	Q8TCN5	953 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	DCAF5	Q96JK2	942 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	UBL7	Q96S82	380 aa	Predicted RBP	6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	REV1	Q9UBZ9	1251 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	PPT2	Q9UMR5	302 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	CORIN	Q9Y5Q5	1042 aa		6.01	□□□□□ -1.45
PTCD3-209	ENST00000472044	PRAMEF27	A3QJZ7	478 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	NEFM	P07197	916 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	GLB1	P16278	677 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	PLCG1	P19174	1290 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	ASPA	P45381	313 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	EIF6	P56537	245 aa	Known RBP	6	□□□□□ -1.45
PTCD3-209	ENST00000472044	MLEC	Q14165	292 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6	□□□□□ -1.45
PTCD3-209	ENST00000472044	MCAT	Q8IVS2	390 aa	Known RBP	6	□□□□□ -1.45
PTCD3-209	ENST00000472044	CPLX3	Q8WVH0	158 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	EZH1	Q92800	747 aa	Predicted RBP	6	□□□□□ -1.45
PTCD3-209	ENST00000472044	HIRIP3	Q9BW71	556 aa	Predicted RBP	6	□□□□□ -1.45
PTCD3-209	ENST00000472044	SSBP4	Q9BWG4	385 aa	Predicted RBP	6	□□□□□ -1.45
PTCD3-209	ENST00000472044	ACSS3	Q9H6R3	686 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	FAM105A	Q9NUU6	356 aa		6	□□□□□ -1.45
PTCD3-209	ENST00000472044	SLC22A31	A6NKX4	558 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	SART1	O43290	800 aa	Known RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	STK10	O94804	968 aa	Known RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	PGR	P06401	933 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	ETF1	P62495	437 aa	Known RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	SOGA3	Q5TF21	947 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	INTS3	Q68E01	1043 aa	Known RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	SLC6A19	Q695T7	634 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	CD163	Q86VB7	1156 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	HID1	Q8IV36	788 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	MRPL41	Q8IXM3	137 aa	Known RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	SMYD4	Q8IYR2	804 aa	Predicted RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	TAB3	Q8N5C8	712 aa	Predicted RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	DHX38	Q92620	1227 aa	Known RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	ACSF2	Q96CM8	615 aa	Predicted RBP	5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	MEGF10	Q96KG7	1140 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	CRBN	Q96SW2	442 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	ZNF408	Q9H9D4	720 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	PIDD1	Q9HB75	910 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	PICK1	Q9NRD5	415 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	GMIP	Q9P107	970 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	PCOLCE2	Q9UKZ9	415 aa		5.99	□□□□□ -1.45
PTCD3-209	ENST00000472044	HCLS1	P14317	486 aa	Predicted RBP	5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	ETFB	P38117	255 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	CHRNA4	P43681	627 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	GSK3A	P49840	483 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	CASP7	P55210	303 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	CDCP2	Q5VXM1	449 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	CCDC81	Q6ZN84	652 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	SLFN12	Q8IYM2	578 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	ARMC10	Q8N2F6	343 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	TMEM40	Q8WWA1	233 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	ISL2	Q96A47	359 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	MYRFL	Q96LU7	910 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	TM9SF2	Q99805	663 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	TJP2	Q9UDY2	1190 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	PRKAG3	Q9UGI9	489 aa		5.98	□□□□□ -1.45
PTCD3-209	ENST00000472044	C1QTNF9B	B2RNN3	333 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	TNFRSF10C	O14798	259 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	GAS2	O43903	313 aa	Known RBP	5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	DNAJA2	O60884	412 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	USP11	P51784	963 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	SLBP	Q14493	270 aa	Known RBP eCLIP	5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	TNNI3K	Q59H18	835 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	NBPF6	Q5VWK0	638 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	CDPF1	Q6NVV7	123 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	CDC37L1	Q7L3B6	337 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	LSR	Q86X29	649 aa	Predicted RBP	5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	C19orf47	Q8N9M1	422 aa	Known RBP	5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	ATG4C	Q96DT6	458 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	TMEM87B	Q96K49	555 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	NBPF4	Q96M43	638 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	YIPF2	Q9BWQ6	316 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	CNNM2	Q9H8M5	875 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	FBRS	Q9HAH7	460 aa		5.97	□□□□□ -1.45
PTCD3-209	ENST00000472044	MRVI1	Q9Y6F6	885 aa		5.97	□□□□□ -1.45

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