RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 FKTNO75072 461 aa17.93■□□□□ 0.46
SSR4-208ENST00000471880 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
SSR4-208ENST00000471880 CRHR2Q13324 411 aa17.93■□□□□ 0.46
SSR4-208ENST00000471880 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
SSR4-208ENST00000471880 DHX36Q9H2U1 1008 aaKnown RBP17.93■□□□□ 0.46
SSR4-208ENST00000471880 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
SSR4-208ENST00000471880 CAP1Q01518 475 aa17.92■□□□□ 0.46
SSR4-208ENST00000471880 NOL9Q5SY16 702 aaKnown RBP17.92■□□□□ 0.46
SSR4-208ENST00000471880 CCDC84Q86UT8 332 aaPredicted RBP17.92■□□□□ 0.46
SSR4-208ENST00000471880 FAM43AQ8N2R8 423 aa17.92■□□□□ 0.46
SSR4-208ENST00000471880 HAUS7Q99871 368 aa17.92■□□□□ 0.46
SSR4-208ENST00000471880 CFHR5Q9BXR6 569 aa17.92■□□□□ 0.46
SSR4-208ENST00000471880 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.92■□□□□ 0.46
SSR4-208ENST00000471880 PI4KBQ9UBF8 816 aa17.92■□□□□ 0.46
SSR4-208ENST00000471880 CCDC85CA6NKD9 419 aa17.91■□□□□ 0.46
SSR4-208ENST00000471880 PHF20L1A8MW92 1017 aa17.91■□□□□ 0.46
SSR4-208ENST00000471880 CTNND1O60716 968 aaKnown RBP17.91■□□□□ 0.46
SSR4-208ENST00000471880 ANKRD45Q5TZF3 282 aa17.91■□□□□ 0.46
SSR4-208ENST00000471880 GADL1Q6ZQY3 521 aa17.91■□□□□ 0.46
SSR4-208ENST00000471880 CTU1Q7Z7A3 348 aaKnown RBP17.91■□□□□ 0.46
SSR4-208ENST00000471880 CRNKL1Q9BZJ0 848 aaKnown RBP17.91■□□□□ 0.46
SSR4-208ENST00000471880 ZFYVE28Q9HCC9 887 aa17.91■□□□□ 0.46
SSR4-208ENST00000471880 TRIM75PA6NK02 468 aa17.9■□□□□ 0.46
SSR4-208ENST00000471880 BTBD19C9JJ37 291 aa17.9■□□□□ 0.46
SSR4-208ENST00000471880 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
SSR4-208ENST00000471880 PTPRAP18433 802 aa17.9■□□□□ 0.46
SSR4-208ENST00000471880 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
SSR4-208ENST00000471880 HERC5Q9UII4 1024 aaKnown RBP17.9■□□□□ 0.46
SSR4-208ENST00000471880 COL2A1P02458 1487 aaPredicted RBP17.89■□□□□ 0.45
SSR4-208ENST00000471880 HTTP42858 3142 aa17.89■□□□□ 0.45
SSR4-208ENST00000471880 TBC1D12O60347 775 aa17.89■□□□□ 0.45
SSR4-208ENST00000471880 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
SSR4-208ENST00000471880 ZSCAN25Q6NSZ9 544 aa17.89■□□□□ 0.45
SSR4-208ENST00000471880 TMED8Q6PL24 325 aaPredicted RBP17.89■□□□□ 0.45
SSR4-208ENST00000471880 EXOC6Q8TAG9 804 aa17.89■□□□□ 0.45
SSR4-208ENST00000471880 ARMT1Q9H993 441 aa17.89■□□□□ 0.45
SSR4-208ENST00000471880 DDX60LQ5H9U9 1706 aaKnown RBP17.89■□□□□ 0.45
SSR4-208ENST00000471880 MBD4O95243 580 aa17.88■□□□□ 0.45
SSR4-208ENST00000471880 GDF11O95390 407 aa17.88■□□□□ 0.45
SSR4-208ENST00000471880 ADD2P35612 726 aa17.88■□□□□ 0.45
SSR4-208ENST00000471880 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
SSR4-208ENST00000471880 MAP3K10Q02779 954 aa17.88■□□□□ 0.45
SSR4-208ENST00000471880 NOM1Q5C9Z4 860 aaKnown RBP17.88■□□□□ 0.45
SSR4-208ENST00000471880 LCORLQ8N3X6 602 aa17.88■□□□□ 0.45
SSR4-208ENST00000471880 SDR42E1Q8WUS8 393 aa17.88■□□□□ 0.45
SSR4-208ENST00000471880 NAV1Q8NEY1 1877 aa17.87■□□□□ 0.45
SSR4-208ENST00000471880 PDHXO00330 501 aa17.87■□□□□ 0.45
SSR4-208ENST00000471880 MOGSQ13724 837 aa17.87■□□□□ 0.45
SSR4-208ENST00000471880 RRP1BQ14684 758 aaKnown RBP17.87■□□□□ 0.45
SSR4-208ENST00000471880 TTC6Q86TZ1 520 aa17.87■□□□□ 0.45
SSR4-208ENST00000471880 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
SSR4-208ENST00000471880 CD99L2Q8TCZ2 262 aa17.87■□□□□ 0.45
SSR4-208ENST00000471880 OTUD7AQ8TE49 926 aaPredicted RBP17.87■□□□□ 0.45
SSR4-208ENST00000471880 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
SSR4-208ENST00000471880 KCNH4Q9UQ05 1017 aa17.87■□□□□ 0.45
SSR4-208ENST00000471880 TRIM17Q9Y577 477 aa17.87■□□□□ 0.45
SSR4-208ENST00000471880 TCRBV5S4A2TA0A5A2 114 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 CXCL11O14625 94 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 ERC2O15083 957 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 CHGBP05060 677 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 CAP2P40123 477 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 SP3Q02447 781 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 GCC1Q96CN9 775 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 DDRGK1Q96HY6 314 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 MCM9Q9NXL9 1143 aa17.86■□□□□ 0.45
SSR4-208ENST00000471880 BAZ2AQ9UIF9 1905 aaKnown RBP17.86■□□□□ 0.45
SSR4-208ENST00000471880 MGAMO43451 1857 aa17.85■□□□□ 0.45
SSR4-208ENST00000471880 SPP2Q13103 211 aa17.85■□□□□ 0.45
SSR4-208ENST00000471880 FASTKD5Q7L8L6 764 aaKnown RBP17.85■□□□□ 0.45
SSR4-208ENST00000471880 ANKRD23Q86SG2 305 aa17.85■□□□□ 0.45
SSR4-208ENST00000471880 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
SSR4-208ENST00000471880 AS3MTQ9HBK9 375 aa17.85■□□□□ 0.45
SSR4-208ENST00000471880 AFG3L2Q9Y4W6 797 aa17.85■□□□□ 0.45
SSR4-208ENST00000471880 LOC285556D6RIA3 1793 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 USP17L5A8MUK1 530 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 PRKAB2O43741 272 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 MX1P20591 662 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 HDAC1Q13547 482 aaPredicted RBP17.84■□□□□ 0.45
SSR4-208ENST00000471880 AAMPQ13685 434 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 AMOTL1Q8IY63 956 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 DNAJC18Q9H819 358 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 CPA4Q9UI42 421 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 SERPINB13Q9UIV8 391 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 DOCK3Q8IZD9 2030 aa17.84■□□□□ 0.45
SSR4-208ENST00000471880 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
SSR4-208ENST00000471880 GLRX3O76003 335 aaKnown RBP17.83■□□□□ 0.44
SSR4-208ENST00000471880 ASNSP08243 561 aa17.83■□□□□ 0.44
SSR4-208ENST00000471880 KIF22Q14807 665 aa17.83■□□□□ 0.44
SSR4-208ENST00000471880 UBE3CQ15386 1083 aa17.83■□□□□ 0.44
SSR4-208ENST00000471880 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
SSR4-208ENST00000471880 KBTBD3Q8NAB2 608 aa17.83■□□□□ 0.44
SSR4-208ENST00000471880 ZNF280CQ8ND82 737 aa17.83■□□□□ 0.44
SSR4-208ENST00000471880 PARK7Q99497 189 aaKnown RBP17.83■□□□□ 0.44
SSR4-208ENST00000471880 FSD1Q9BTV5 496 aa17.83■□□□□ 0.44
SSR4-208ENST00000471880 ZCCHC17Q9NP64 241 aaKnown RBP17.83■□□□□ 0.44
SSR4-208ENST00000471880 SLC4A4Q9Y6R1 1079 aa17.83■□□□□ 0.44
SSR4-208ENST00000471880 KIAA0100Q14667 2235 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms