RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 RING1Q06587 406 aa6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 PCNX4Q63HM2 1172 aa6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 SV2BQ7L1I2 683 aa6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 HDXQ7Z353 690 aa6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 ASB11Q8WXH4 323 aa6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 HEXIM2Q96MH2 286 aaKnown RBP6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 RC3H2Q9HBD1 1191 aaKnown RBP6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 PLAGL2Q9UPG8 496 aa6.5□□□□□ -1.37
PRPF40A-207ENST00000471701 GNAT3A8MTJ3 354 aa6.49□□□□□ -1.37
PRPF40A-207ENST00000471701 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
PRPF40A-207ENST00000471701 ZBTB37Q5TC79 503 aa6.49□□□□□ -1.37
PRPF40A-207ENST00000471701 ANGEL2Q5VTE6 544 aaKnown RBP6.49□□□□□ -1.37
PRPF40A-207ENST00000471701 OGFOD2Q6N063 350 aa6.49□□□□□ -1.37
PRPF40A-207ENST00000471701 ATG4DQ86TL0 474 aaPredicted RBP6.49□□□□□ -1.37
PRPF40A-207ENST00000471701 TRAIPQ9BWF2 469 aa6.49□□□□□ -1.37
PRPF40A-207ENST00000471701 P4HBP07237 508 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-207ENST00000471701 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-207ENST00000471701 CELA3AP09093 270 aa6.48□□□□□ -1.37
PRPF40A-207ENST00000471701 CD96P40200 585 aa6.48□□□□□ -1.37
PRPF40A-207ENST00000471701 FAM214BQ7L5A3 538 aa6.48□□□□□ -1.37
PRPF40A-207ENST00000471701 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
PRPF40A-207ENST00000471701 PRAMEF27A3QJZ7 478 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 LRIG2O94898 1065 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 ETF1P62495 437 aaKnown RBP6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 INPP5AQ14642 412 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 RASIP1Q5U651 963 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 TTBK2Q6IQ55 1244 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 SLC23A3Q6PIS1 610 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 WFDC3Q8IUB2 231 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 TNKS2Q9H2K2 1166 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 PRDM5Q9NQX1 630 aaPredicted RBP6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 MBNL3Q9NUK0 354 aaKnown RBP6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 U3KQE9 123 aa6.47□□□□□ -1.37
PRPF40A-207ENST00000471701 PAPLNO95428 1278 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 GNA15P30679 374 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 NTF4P34130 210 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 CCDC85BQ15834 202 aaPredicted RBP6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 LRFN4Q6PJG9 635 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 POU5F2Q8N7G0 328 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 FOXQ1Q9C009 403 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 WNT10AQ9GZT5 417 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 TPX2Q9ULW0 747 aaKnown RBP6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 AK5Q9Y6K8 562 aa6.46□□□□□ -1.38
PRPF40A-207ENST00000471701 FAM155AB1AL88 458 aaPredicted RBP6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 PRPF40AO75400 957 aaKnown RBP6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 EOMESO95936 686 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 ZP2Q05996 745 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 PTPN11Q06124 597 aaPredicted RBP6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 IKZF1Q13422 519 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 EAPPQ56P03 285 aaPredicted RBP6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 DIEXFQ68CQ4 756 aaKnown RBP6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 ARMCX6Q7L4S7 300 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 CYFIP1Q7L576 1253 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 UBE3DQ7Z6J8 389 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 HID1Q8IV36 788 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 MFSD2AQ8NA29 543 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 PLPPR2Q96GM1 343 aa6.45□□□□□ -1.38
PRPF40A-207ENST00000471701 FZD5Q13467 585 aa6.44□□□□□ -1.38
PRPF40A-207ENST00000471701 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
PRPF40A-207ENST00000471701 LRRN4CLQ8ND94 238 aa6.44□□□□□ -1.38
PRPF40A-207ENST00000471701 TMEM40Q8WWA1 233 aa6.44□□□□□ -1.38
PRPF40A-207ENST00000471701 FAM168AQ92567 244 aa6.44□□□□□ -1.38
PRPF40A-207ENST00000471701 ADAMTS6Q9UKP5 1117 aa6.44□□□□□ -1.38
PRPF40A-207ENST00000471701 MAPK8IP1Q9UQF2 711 aa6.44□□□□□ -1.38
PRPF40A-207ENST00000471701 CYP7A1P22680 504 aa6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 CLCN7P51798 805 aa6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 RPS26P62854 115 aaKnown RBP6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 NKPD1Q17RQ9 610 aa6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 WIPI1Q5MNZ9 446 aaPredicted RBP6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 SPACA3Q8IXA5 215 aa6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 MIPEPQ99797 713 aa6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 DUSP9Q99956 384 aaKnown RBP6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 LMCD1Q9NZU5 365 aa6.43□□□□□ -1.38
PRPF40A-207ENST00000471701 ANKRD33BA6NCL7 494 aa6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 SLITRK5O94991 958 aa6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 C8AP07357 584 aa6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 SLBPQ14493 270 aaKnown RBP eCLIP6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 ZNF746Q6NUN9 644 aaPredicted RBP6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 AEBP1Q8IUX7 1158 aa6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 FBRSQ9HAH7 460 aa6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 PRDM7Q9NQW5 492 aa6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
PRPF40A-207ENST00000471701 FARP2O94887 1054 aaPredicted RBP6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 RLBP1P12271 317 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 GRK4P32298 578 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 CAP2P40123 477 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 MAP3K11Q16584 847 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 CDKAL1Q5VV42 579 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 HSPA12BQ96MM6 686 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 MIR1-1HGQ9H1L0 117 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 PCDHB5Q9Y5E4 795 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 TACC3Q9Y6A5 838 aa6.41□□□□□ -1.38
PRPF40A-207ENST00000471701 CBX7O95931 251 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 AFMP43652 599 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 XPCQ01831 940 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 NKG7Q16617 165 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 LETMD1Q6P1Q0 360 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 AGMOQ6ZNB7 445 aa6.4□□□□□ -1.38
PRPF40A-207ENST00000471701 NPAS4Q8IUM7 802 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms