RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
CHMP2B-203ENST00000471660 DHX58Q96C10 678 aa12.25□□□□□ -0.45
CHMP2B-203ENST00000471660 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
CHMP2B-203ENST00000471660 SHTN1A0MZ66 631 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 SNUPNO95149 360 aaKnown RBP12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 RPS6KA3P51812 740 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 GNG11P61952 73 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 B4GALNT4Q76KP1 1039 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 ABHD8Q96I13 439 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 ATP6V0A4Q9HBG4 840 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 WDR17Q8IZU2 1322 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 PRPHP41219 470 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 ARHGAP25P42331 645 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 IRAK1P51617 712 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 FLIIQ13045 1269 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 MTA1Q13330 715 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 CDCA2Q69YH5 1023 aaPredicted RBP12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 WDR93Q6P2C0 686 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 CCDC50Q8IVM0 306 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 IFNKQ9P0W0 207 aa12.24□□□□□ -0.45
CHMP2B-203ENST00000471660 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 KIF13BQ9NQT8 1826 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 MRC1P22897 1456 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 A6NNZ2 444 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 RASSF9O75901 435 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 TUBB8Q3ZCM7 444 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 MICAL1Q8TDZ2 1067 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 LSG1Q9H089 658 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 BATF3Q9NR55 127 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 KLC4Q9NSK0 619 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 TFCP2L1Q9NZI6 479 aa12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 CPSF2Q9P2I0 782 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-203ENST00000471660 LRRIQ3A6PVS8 624 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 KINO60870 393 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 RAB11FIP3O75154 756 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 TCP11Q8WWU5 503 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 MYO1FO00160 1098 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 PHACTR2O75167 634 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 PECAM1P16284 738 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 CTCFP49711 727 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 TEFQ10587 303 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 PPFIA1Q13136 1202 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 HSP90AB4PQ58FF6 505 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 KLHL23Q8NBE8 558 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 CDC23Q9UJX2 597 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-203ENST00000471660 EIF3HO15372 352 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 MEFVO15553 781 aaPredicted RBP12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 FAM173BQ6P4H8 233 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 ANKRD23Q86SG2 305 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 IGSF22Q8N9C0 903 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 DRAXINQ8NBI3 349 aaPredicted RBP12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 ANKRD24Q8TF21 1146 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 IL25Q9H293 177 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 ZSWIM6Q9HCJ5 1215 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 CAND2O75155 1236 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 VSNL1P62760 191 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 ATP8B2P98198 1209 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 CEP85LQ5SZL2 805 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 KIAA1328Q86T90 577 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 FERMT3Q86UX7 667 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 PSMD1Q99460 953 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 KAT14Q9H8E8 782 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 IRAK4Q9NWZ3 460 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 CFAP45Q9UL16 551 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
CHMP2B-203ENST00000471660 GRIN2DO15399 1336 aa12.21□□□□□ -0.46
CHMP2B-203ENST00000471660 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 APBB1O00213 710 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 ALDH1L1O75891 902 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 KIAA0754O94854 1291 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 ME3Q16798 604 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 ENGASEQ8NFI3 743 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 EZRP15311 586 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 GCKP35557 465 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 ZNF530Q6P9A1 599 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 ZNF513Q8N8E2 541 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 FAM76AQ8TAV0 307 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 BCAS4Q8TDM0 211 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 DBF4Q9UBU7 674 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-203ENST00000471660 GGA2Q9UJY4 613 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms