RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PLAGL2Q9UPG8 496 aa9.02□□□□□ -0.97
PRPF40A-206ENST00000471167 SORBS3O60504 671 aa9.01□□□□□ -0.97
PRPF40A-206ENST00000471167 PLD6Q8N2A8 252 aaKnown RBP9.01□□□□□ -0.97
PRPF40A-206ENST00000471167 CRELD1Q96HD1 420 aa9.01□□□□□ -0.97
PRPF40A-206ENST00000471167 EOMESO95936 686 aa9□□□□□ -0.97
PRPF40A-206ENST00000471167 WNT11O96014 354 aa9□□□□□ -0.97
PRPF40A-206ENST00000471167 OXCT1P55809 520 aa9□□□□□ -0.97
PRPF40A-206ENST00000471167 MRPL58Q14197 206 aaKnown RBP9□□□□□ -0.97
PRPF40A-206ENST00000471167 SPRED2Q7Z698 418 aa9□□□□□ -0.97
PRPF40A-206ENST00000471167 ELMO3Q96BJ8 720 aa9□□□□□ -0.97
PRPF40A-206ENST00000471167 WNT10AQ9GZT5 417 aa9□□□□□ -0.97
PRPF40A-206ENST00000471167 SNCAIPQ9Y6H5 919 aa9□□□□□ -0.97
PRPF40A-206ENST00000471167 PRAMEF27A3QJZ7 478 aa8.99□□□□□ -0.97
PRPF40A-206ENST00000471167 GIPC2Q8TF65 315 aa8.99□□□□□ -0.97
PRPF40A-206ENST00000471167 BCL2L13Q9BXK5 485 aa8.99□□□□□ -0.97
PRPF40A-206ENST00000471167 SSU72Q9NP77 194 aaKnown RBP8.99□□□□□ -0.97
PRPF40A-206ENST00000471167 PRDM10Q9NQV6 1147 aa8.99□□□□□ -0.97
PRPF40A-206ENST00000471167 FAM221AA4D161 298 aa8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 HNRNPUQ00839 825 aaKnown RBP eCLIP8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 CYP27C1Q4G0S4 372 aa8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 BNC2Q6ZN30 1099 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 HDXQ7Z353 690 aa8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 ABI1Q8IZP0 508 aa8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 RIN3Q8TB24 985 aa8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 RHOVQ96L33 236 aa8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 PAK6Q9NQU5 681 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 BSDC1Q9NW68 430 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-206ENST00000471167 SLITRK5O94991 958 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 GARTP22102 1010 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 BNIP3Q12983 259 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 ZNF574Q6ZN55 896 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 ARMCX6Q7L4S7 300 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 ZNF507Q8TCN5 953 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 BCL7CQ8WUZ0 217 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 COPRSQ9NQ92 184 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 VTI1BQ9UEU0 232 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 ADGRE2Q9UHX3 823 aa8.97□□□□□ -0.97
PRPF40A-206ENST00000471167 PF4P02776 101 aa8.96□□□□□ -0.98
PRPF40A-206ENST00000471167 GRK4P32298 578 aa8.96□□□□□ -0.98
PRPF40A-206ENST00000471167 CAP2P40123 477 aa8.96□□□□□ -0.98
PRPF40A-206ENST00000471167 CD96P40200 585 aa8.96□□□□□ -0.98
PRPF40A-206ENST00000471167 JARID2Q92833 1246 aaPredicted RBP8.96□□□□□ -0.98
PRPF40A-206ENST00000471167 RSRP1Q9BUV0 290 aa8.96□□□□□ -0.98
PRPF40A-206ENST00000471167 F13A1P00488 732 aa8.95□□□□□ -0.98
PRPF40A-206ENST00000471167 ZNF16P17020 682 aaPredicted RBP8.95□□□□□ -0.98
PRPF40A-206ENST00000471167 CAMK2GQ13555 558 aaPredicted RBP8.95□□□□□ -0.98
PRPF40A-206ENST00000471167 ERMP1Q7Z2K6 904 aa8.95□□□□□ -0.98
PRPF40A-206ENST00000471167 MIR1-1HGQ9H1L0 117 aa8.95□□□□□ -0.98
PRPF40A-206ENST00000471167 TJP2Q9UDY2 1190 aa8.95□□□□□ -0.98
PRPF40A-206ENST00000471167 CILPO75339 1184 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 LRIG2O94898 1065 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 LMNB2Q03252 620 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 TMCO4Q5TGY1 634 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 VSIG10LQ86VR7 867 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 TMEM74Q96NL1 305 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 TNKS2Q9H2K2 1166 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 PICK1Q9NRD5 415 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 CORINQ9Y5Q5 1042 aa8.94□□□□□ -0.98
PRPF40A-206ENST00000471167 PRR33A8MZF0 331 aa8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 NKPD1Q17RQ9 610 aa8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 TSNAXIP1Q2TAA8 658 aa8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 CBLL1Q75N03 491 aa8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 CDC37L1Q7L3B6 337 aa8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 NETO1Q8TDF5 533 aa8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 MKNK2Q9HBH9 465 aa8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 COL17A1Q9UMD9 1497 aaPredicted RBP8.93□□□□□ -0.98
PRPF40A-206ENST00000471167 RLBP1P12271 317 aa8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 ETF1P62495 437 aaKnown RBP8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 RPL6Q02878 288 aaKnown RBP8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 PRAMEF13Q5VWM6 474 aa8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 HID1Q8IV36 788 aa8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 HOMEZQ8IX15 550 aa8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 SPACA3Q8IXA5 215 aa8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 FOXQ1Q9C009 403 aa8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 TACC3Q9Y6A5 838 aa8.92□□□□□ -0.98
PRPF40A-206ENST00000471167 IGF2BP3O00425 579 aaKnown RBP eCLIP8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 CST3P01034 146 aaPredicted RBP8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 CEACAM5P06731 702 aa8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 MFAP1P55081 439 aaKnown RBP8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 FAM160A1Q05DH4 1040 aa8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 TRIM26Q12899 539 aaPredicted RBP8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 MCTP1Q6DN14 999 aa8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 CCDC84Q86UT8 332 aaPredicted RBP8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 KCT2Q8NC54 265 aa8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 FBXO27Q8NI29 283 aa8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 ACSF2Q96CM8 615 aaPredicted RBP8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 MRS2Q9HD23 443 aa8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 KBTBD4Q9NVX7 518 aa8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 POLR3KQ9Y2Y1 108 aaPredicted RBP8.91□□□□□ -0.98
PRPF40A-206ENST00000471167 ZBTB7CA1YPR0 619 aa8.9□□□□□ -0.98
PRPF40A-206ENST00000471167 MINDY4BA8MYZ0 360 aa8.9□□□□□ -0.98
PRPF40A-206ENST00000471167 CD8BP10966 210 aa8.9□□□□□ -0.98
PRPF40A-206ENST00000471167 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
PRPF40A-206ENST00000471167 GATAD2BQ8WXI9 593 aa8.9□□□□□ -0.98
PRPF40A-206ENST00000471167 DPH2Q9BQC3 489 aaPredicted RBP8.9□□□□□ -0.98
PRPF40A-206ENST00000471167 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-206ENST00000471167 UPK3BL1B0FP48 263 aa8.89□□□□□ -0.99
PRPF40A-206ENST00000471167 UPK3BL2E5RIL1 263 aa8.89□□□□□ -0.99
PRPF40A-206ENST00000471167 TAL1P17542 331 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-206ENST00000471167 ITIH2P19823 946 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms