RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 OSGEPQ9NPF4 335 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 BTG4Q9NY30 223 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 NALCNQ8IZF0 1738 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 TM4SF5O14894 197 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 PREPP48147 710 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 LCE1DQ5T752 114 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 NUTM2GQ5VZR2 741 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 KRT27Q7Z3Y8 459 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 RUSC1Q9BVN2 902 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 ADAM19Q9H013 955 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
GPNMB-208ENST00000470994 LEMD3Q9Y2U8 911 aa8.38□□□□□ -1.07
GPNMB-208ENST00000470994 ARHGEF10O15013 1369 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 DDX3YO15523 660 aaKnown RBP8.37□□□□□ -1.07
GPNMB-208ENST00000470994 ADAM11O75078 769 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 ZAP70P43403 619 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 KLHDC7BQ96G42 594 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 PRIMPOLQ96LW4 560 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 PRDM11Q9NQV5 511 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
GPNMB-208ENST00000470994 RALGAPBQ86X10 1494 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 TNS3Q68CZ2 1445 aa8.37□□□□□ -1.07
GPNMB-208ENST00000470994 SBNO1A3KN83 1393 aa8.36□□□□□ -1.07
GPNMB-208ENST00000470994 CDC42BPGQ6DT37 1551 aa8.36□□□□□ -1.07
GPNMB-208ENST00000470994 ARL4DP49703 201 aa8.36□□□□□ -1.07
GPNMB-208ENST00000470994 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
GPNMB-208ENST00000470994 MFSD14AQ96MC6 490 aa8.36□□□□□ -1.07
GPNMB-208ENST00000470994 PRR36Q9H6K5 1346 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 PRMT3O60678 531 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 EVA1CP58658 441 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 ZC3H6P61129 1189 aaKnown RBP8.35□□□□□ -1.07
GPNMB-208ENST00000470994 CHRNA2Q15822 529 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 CEP120Q8N960 986 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 ABTB2Q8N961 1025 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 ASIC4Q96FT7 647 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 FBXL18Q96ME1 805 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 CDK19Q9BWU1 502 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 OSBPL1AQ9BXW6 950 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 SAP130Q9H0E3 1048 aa8.35□□□□□ -1.07
GPNMB-208ENST00000470994 SLIT2O94813 1529 aa8.34□□□□□ -1.07
GPNMB-208ENST00000470994 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
GPNMB-208ENST00000470994 MAP4P27816 1152 aaKnown RBP8.34□□□□□ -1.07
GPNMB-208ENST00000470994 NLRP12P59046 1061 aa8.34□□□□□ -1.07
GPNMB-208ENST00000470994 PDE12Q6L8Q7 609 aaKnown RBP8.34□□□□□ -1.07
GPNMB-208ENST00000470994 GPR152Q8TDT2 470 aa8.34□□□□□ -1.07
GPNMB-208ENST00000470994 POP1Q99575 1024 aaKnown RBP8.34□□□□□ -1.07
GPNMB-208ENST00000470994 USP35Q9P2H5 1018 aa8.34□□□□□ -1.07
GPNMB-208ENST00000470994 BLMP54132 1417 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-208ENST00000470994 PPLO60437 1756 aa8.33□□□□□ -1.08
GPNMB-208ENST00000470994 FOSL1P15407 271 aa8.33□□□□□ -1.08
GPNMB-208ENST00000470994 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
GPNMB-208ENST00000470994 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
GPNMB-208ENST00000470994 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-208ENST00000470994 KRTAP4-7Q9BYR0 210 aa8.33□□□□□ -1.08
GPNMB-208ENST00000470994 EIF3AQ14152 1382 aaKnown RBP8.33□□□□□ -1.08
GPNMB-208ENST00000470994 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
GPNMB-208ENST00000470994 MEGF11A6BM72 1044 aa8.32□□□□□ -1.08
GPNMB-208ENST00000470994 TNFRSF10BO14763 440 aa8.32□□□□□ -1.08
GPNMB-208ENST00000470994 RPLP1P05386 114 aaKnown RBP8.32□□□□□ -1.08
GPNMB-208ENST00000470994 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-208ENST00000470994 SRPK2P78362 688 aaKnown RBP8.32□□□□□ -1.08
GPNMB-208ENST00000470994 OCLNQ16625 522 aa8.32□□□□□ -1.08
GPNMB-208ENST00000470994 NBPF8Q3BBV2 869 aa8.32□□□□□ -1.08
GPNMB-208ENST00000470994 SLC7A3Q8WY07 619 aa8.32□□□□□ -1.08
GPNMB-208ENST00000470994 STIM2Q9P246 746 aa8.32□□□□□ -1.08
GPNMB-208ENST00000470994 CYP2E1P05181 493 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-208ENST00000470994 C19orf57Q0VDD7 668 aa8.31□□□□□ -1.08
GPNMB-208ENST00000470994 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
GPNMB-208ENST00000470994 FBXL6Q8N531 539 aa8.31□□□□□ -1.08
GPNMB-208ENST00000470994 ZMYND15Q9H091 742 aa8.31□□□□□ -1.08
GPNMB-208ENST00000470994 ELP3Q9H9T3 547 aa8.31□□□□□ -1.08
GPNMB-208ENST00000470994 CYP4F12Q9HCS2 524 aa8.31□□□□□ -1.08
GPNMB-208ENST00000470994 LAMC1P11047 1609 aa8.31□□□□□ -1.08
GPNMB-208ENST00000470994 ACEP12821 1306 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 SPATA31A5Q5VU36 1347 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 SPATA31A7Q8IWB4 1347 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 TRIM37O94972 964 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 PRNPP04156 253 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 MSMPQ1L6U9 139 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 OGFOD2Q6N063 350 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 ADAMTSL4Q6UY14 1074 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 ZNF438Q7Z4V0 828 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 TP53INP2Q8IXH6 220 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
GPNMB-208ENST00000470994 COL22A1Q8NFW1 1626 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-208ENST00000470994 JUNBP17275 347 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-208ENST00000470994 JAG1P78504 1218 aa8.29□□□□□ -1.08
GPNMB-208ENST00000470994 R3HDM1Q15032 1099 aaKnown RBP8.29□□□□□ -1.08
GPNMB-208ENST00000470994 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
GPNMB-208ENST00000470994 SGO2Q562F6 1265 aa8.29□□□□□ -1.08
GPNMB-208ENST00000470994 PAOXQ6QHF9 649 aa8.29□□□□□ -1.08
GPNMB-208ENST00000470994 FAM196AQ6ZSG2 479 aa8.29□□□□□ -1.08
GPNMB-208ENST00000470994 PDE2AO00408 941 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-208ENST00000470994 F13BP05160 661 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 ELOAQ14241 798 aaKnown RBP8.28□□□□□ -1.08
GPNMB-208ENST00000470994 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-208ENST00000470994 EZH2Q15910 746 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms