RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 PROCP04070 461 aa9.55□□□□□ -0.88
PTP4A1-202ENST00000470661 SND1Q7KZF4 910 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTP4A1-202ENST00000470661 CCDC74AQ96AQ1 378 aa9.55□□□□□ -0.88
PTP4A1-202ENST00000470661 PCGF6Q9BYE7 350 aa9.55□□□□□ -0.88
PTP4A1-202ENST00000470661 MUC3BQ9H195 1237 aa9.55□□□□□ -0.88
PTP4A1-202ENST00000470661 CDC42BPGQ6DT37 1551 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 PXDNQ92626 1479 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 DSC3Q14574 896 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 GALNT11Q8NCW6 608 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 NACC1Q96RE7 527 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 BHLHE41Q9C0J9 482 aaPredicted RBP9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 DNAJC25Q9H1X3 360 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 USP21Q9UK80 565 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 SHPRHQ149N8 1683 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 SPATA31A3Q5VYP0 1347 aa9.54□□□□□ -0.88
PTP4A1-202ENST00000470661 KNDC1Q76NI1 1749 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 DLL1O00548 723 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 RXRBP28702 533 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 PLCB3Q01970 1234 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 ZNF772Q68DY9 489 aaPredicted RBP9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 ZSCAN29Q8IWY8 852 aaPredicted RBP9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 NGDNQ8NEJ9 315 aaKnown RBP9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 ASB16Q96NS5 453 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 LIN7BQ9HAP6 207 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 SOX13Q9UN79 622 aa9.53□□□□□ -0.88
PTP4A1-202ENST00000470661 PNMA6FA0A0J9YX94 578 aa9.52□□□□□ -0.89
PTP4A1-202ENST00000470661 H3BRJ5 948 aa9.52□□□□□ -0.89
PTP4A1-202ENST00000470661 EPS8L3Q8TE67 593 aaKnown RBP9.52□□□□□ -0.89
PTP4A1-202ENST00000470661 BSNDQ8WZ55 320 aa9.52□□□□□ -0.89
PTP4A1-202ENST00000470661 LENG1Q96BZ8 264 aaPredicted RBP9.52□□□□□ -0.89
PTP4A1-202ENST00000470661 EHD4Q9H223 541 aa9.52□□□□□ -0.89
PTP4A1-202ENST00000470661 USP32Q8NFA0 1604 aa9.52□□□□□ -0.89
PTP4A1-202ENST00000470661 C9orf172C9J069 976 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 FSCN2O14926 492 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 IGHA1P01876 353 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 CABP4P57796 275 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 HGSNATQ68CP4 663 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 FAM117BQ6P1L5 589 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 PI16Q6UXB8 463 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 CCNJLQ8IV13 435 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 MAP4K3Q8IVH8 894 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 TCF12Q99081 682 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
PTP4A1-202ENST00000470661 LAMC1P11047 1609 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 FAM83GA6ND36 823 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 GADD45BO75293 160 aaPredicted RBP9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 MAPK8P45983 427 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 GRIA4P48058 902 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 MBTPS1Q14703 1052 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 SPRED3Q2MJR0 410 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 KIAA0319Q5VV43 1072 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 SLC7A3Q8WY07 619 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 GZF1Q9H116 711 aaPredicted RBP9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 SRA1Q9HD15 236 aaKnown RBP9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 KCNK4Q9NYG8 393 aa9.5□□□□□ -0.89
PTP4A1-202ENST00000470661 TM4SF5O14894 197 aa9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 FMR1Q06787 632 aaKnown RBP eCLIP9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 ADGRE1Q14246 886 aa9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 ENOX2Q16206 610 aaKnown RBP9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 FOXD4L6Q3SYB3 417 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 IGF2-ASQ6U949 168 aa9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 FOXD4L3Q6VB84 417 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 ACEP12821 1306 aa9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 CENPJQ9HC77 1338 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-202ENST00000470661 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 DDX3YO15523 660 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 CD68P34810 354 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 GATA4P43694 442 aa9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 RBM6P78332 1123 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 NRG1Q02297 640 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 CHRNA2Q15822 529 aa9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 HOMEZQ8IX15 550 aa9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 KLHDC7BQ96G42 594 aa9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 ROCK2O75116 1388 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-202ENST00000470661 A0A096LPE4 126 aa9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 A0A1W2PPZ6 126 aa9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 WISP1O95388 367 aa9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 ZC3H6P61129 1189 aaKnown RBP9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 IKBKEQ14164 716 aa9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 GRM2Q14416 872 aa9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 TNS3Q68CZ2 1445 aa9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 BCL9LQ86UU0 1499 aa9.47□□□□□ -0.89
PTP4A1-202ENST00000470661 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 SOX1O00570 391 aaPredicted RBP9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 ADAM11O75078 769 aa9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 ALX3O95076 343 aa9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 TXNRD3Q86VQ6 643 aa9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 AGGF1Q8N302 714 aaeCLIP9.46□□□□□ -0.93e-7■□□□□ 8.1
PTP4A1-202ENST00000470661 KLHL23Q8NBE8 558 aa9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 FOXD4L4Q8WXT5 416 aaPredicted RBP9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 WWC3Q9ULE0 1092 aa9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 CCDC9Q9Y3X0 531 aaKnown RBP9.46□□□□□ -0.9
PTP4A1-202ENST00000470661 GPRASP1Q5JY77 1395 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms