RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 OSBPL1AQ9BXW6 950 aa7□□□□□ -1.29
COL9A1-206ENST00000470652 LGR6Q9HBX8 967 aa7□□□□□ -1.29
COL9A1-206ENST00000470652 PICK1Q9NRD5 415 aa7□□□□□ -1.29
COL9A1-206ENST00000470652 C1GALT1Q9NS00 363 aa7□□□□□ -1.29
COL9A1-206ENST00000470652 ANGEL1Q9UNK9 670 aaKnown RBP7□□□□□ -1.29
COL9A1-206ENST00000470652 LEMD3Q9Y2U8 911 aa7□□□□□ -1.29
COL9A1-206ENST00000470652 CSADQ9Y600 493 aa7□□□□□ -1.29
COL9A1-206ENST00000470652 SNCAIPQ9Y6H5 919 aa7□□□□□ -1.29
COL9A1-206ENST00000470652 RELL1Q8IUW5 271 aa6.99□□□□□ -1.29
COL9A1-206ENST00000470652 ISL2Q96A47 359 aa6.99□□□□□ -1.29
COL9A1-206ENST00000470652 RSRP1Q9BUV0 290 aa6.99□□□□□ -1.29
COL9A1-206ENST00000470652 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
COL9A1-206ENST00000470652 PCDHB5Q9Y5E4 795 aa6.99□□□□□ -1.29
COL9A1-206ENST00000470652 DYNC1LI2O43237 492 aaPredicted RBP6.98□□□□□ -1.29
COL9A1-206ENST00000470652 NEFMP07197 916 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 TFE3P19532 575 aaPredicted RBP6.98□□□□□ -1.29
COL9A1-206ENST00000470652 ADMP35318 185 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 INPP5AQ14642 412 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 TSNAXIP1Q2TAA8 658 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 DUSP27Q5VZP5 1158 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 LRFN4Q6PJG9 635 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 OGFOD3Q6PK18 319 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
COL9A1-206ENST00000470652 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
COL9A1-206ENST00000470652 KCT2Q8NC54 265 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 PHC3Q8NDX5 983 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 GATA6Q92908 595 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 TLR6Q9Y2C9 796 aa6.98□□□□□ -1.29
COL9A1-206ENST00000470652 SEPT6Q14141 434 aa6.97□□□□□ -1.29
COL9A1-206ENST00000470652 ZBTB37Q5TC79 503 aa6.97□□□□□ -1.29
COL9A1-206ENST00000470652 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.97□□□□□ -1.29
COL9A1-206ENST00000470652 CDC37L1Q7L3B6 337 aa6.97□□□□□ -1.29
COL9A1-206ENST00000470652 CYFIP1Q7L576 1253 aa6.97□□□□□ -1.29
COL9A1-206ENST00000470652 PLPPR2Q96GM1 343 aa6.97□□□□□ -1.29
COL9A1-206ENST00000470652 TMEM74Q96NL1 305 aa6.97□□□□□ -1.29
COL9A1-206ENST00000470652 PRAMEF27A3QJZ7 478 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 FAM170BA6NMN3 283 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 FOSL1P15407 271 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 GBP2P32456 591 aaPredicted RBP6.96□□□□□ -1.3
COL9A1-206ENST00000470652 NTF4P34130 210 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 LMNB2Q03252 620 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 CYP27C1Q4G0S4 372 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 WIPI1Q5MNZ9 446 aaPredicted RBP6.96□□□□□ -1.3
COL9A1-206ENST00000470652 OGFOD2Q6N063 350 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 SHISA5Q8N114 240 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 ZNF507Q8TCN5 953 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 CCDC39Q9UFE4 941 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 TACC3Q9Y6A5 838 aa6.96□□□□□ -1.3
COL9A1-206ENST00000470652 GFRA2O00451 464 aa6.95□□□□□ -1.3
COL9A1-206ENST00000470652 CDK5R2Q13319 367 aa6.95□□□□□ -1.3
COL9A1-206ENST00000470652 CAMK2GQ13555 558 aaPredicted RBP6.95□□□□□ -1.3
COL9A1-206ENST00000470652 ZNF765Q7L2R6 523 aa6.95□□□□□ -1.3
COL9A1-206ENST00000470652 TP53INP2Q8IXH6 220 aa6.95□□□□□ -1.3
COL9A1-206ENST00000470652 TMEM87AQ8NBN3 555 aa6.95□□□□□ -1.3
COL9A1-206ENST00000470652 JARID2Q92833 1246 aaPredicted RBP6.95□□□□□ -1.3
COL9A1-206ENST00000470652 WNT10AQ9GZT5 417 aa6.95□□□□□ -1.3
COL9A1-206ENST00000470652 CCDC9Q9Y3X0 531 aaKnown RBP6.95□□□□□ -1.3
COL9A1-206ENST00000470652 F6X3S4 739 aa6.94□□□□□ -1.3
COL9A1-206ENST00000470652 CYP26A1O43174 497 aa6.94□□□□□ -1.3
COL9A1-206ENST00000470652 PF4P02776 101 aa6.94□□□□□ -1.3
COL9A1-206ENST00000470652 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
COL9A1-206ENST00000470652 MSMPQ1L6U9 139 aa6.94□□□□□ -1.3
COL9A1-206ENST00000470652 HS2ST1Q7LGA3 356 aa6.94□□□□□ -1.3
COL9A1-206ENST00000470652 ERMP1Q7Z2K6 904 aa6.94□□□□□ -1.3
COL9A1-206ENST00000470652 BACH2Q9BYV9 841 aa6.94□□□□□ -1.3
COL9A1-206ENST00000470652 UNC13AQ9UPW8 1703 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 FAM87AP0C7U9 286 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 CDK8P49336 464 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
COL9A1-206ENST00000470652 RGS22Q8NE09 1264 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 GATAD2BQ8WXI9 593 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 ASIC4Q96FT7 647 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 RHOVQ96L33 236 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 FBXL18Q96ME1 805 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 KBTBD4Q9NVX7 518 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 GGT7Q9UJ14 662 aa6.93□□□□□ -1.3
COL9A1-206ENST00000470652 NACADO15069 1562 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 RB1CC1Q8TDY2 1594 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 SCRIBQ14160 1630 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 CILPO75339 1184 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 BPNT1O95861 308 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 VAMP1P23763 118 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 JAG1P78504 1218 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 LDLRAD1Q5T700 205 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 BNC2Q6ZN30 1099 aaPredicted RBP6.92□□□□□ -1.3
COL9A1-206ENST00000470652 CBLL1Q75N03 491 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 HID1Q8IV36 788 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 DUSP23Q9BVJ7 150 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 SHROOM4Q9ULL8 1493 aa6.92□□□□□ -1.3
COL9A1-206ENST00000470652 FAM221AA4D161 298 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 LRIG2O94898 1065 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 PRNPP04156 253 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 C8AP07357 584 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 GRK4P32298 578 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 CAP2P40123 477 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 PDE4BQ07343 736 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 SNAP47Q5SQN1 464 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 GOLM1Q8NBJ4 401 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 LRRC4CQ9HCJ2 640 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms