RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 SLC45A1Q9Y2W3 748 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 MYH7P12883 1935 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 MYH1P12882 1939 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
RFTN1-208ENST00000470458 PHF20L1A8MW92 1017 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 IRF6O14896 467 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 CTU1Q7Z7A3 348 aaKnown RBP13.12□□□□□ -0.31
RFTN1-208ENST00000470458 ANKRD23Q86SG2 305 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 METTL16Q86W50 562 aaKnown RBP13.12□□□□□ -0.31
RFTN1-208ENST00000470458 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 DDX4Q9NQI0 724 aaKnown RBP13.12□□□□□ -0.31
RFTN1-208ENST00000470458 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 FLT1P17948 1338 aa13.12□□□□□ -0.31
RFTN1-208ENST00000470458 POLR3DP05423 398 aaPredicted RBP13.11□□□□□ -0.31
RFTN1-208ENST00000470458 PTPRAP18433 802 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 GNAT2P19087 354 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 INPP5BP32019 993 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 CAP2P40123 477 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 TAF1CQ15572 869 aaPredicted RBP13.11□□□□□ -0.31
RFTN1-208ENST00000470458 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 SERPINB13Q9UIV8 391 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 ZNF532Q9HCE3 1301 aa13.11□□□□□ -0.31
RFTN1-208ENST00000470458 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 MX1P20591 662 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 ADD2P35612 726 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 DGKZQ13574 1117 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 SH3BP5LQ7L8J4 393 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 MIGA1Q8NAN2 632 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
RFTN1-208ENST00000470458 ZNF287Q9HBT7 754 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 SWAP70Q9UH65 585 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
RFTN1-208ENST00000470458 HOXD10P28358 340 aa13.09□□□□□ -0.31
RFTN1-208ENST00000470458 PRMT2P55345 433 aa13.09□□□□□ -0.31
RFTN1-208ENST00000470458 SP3Q02447 781 aa13.09□□□□□ -0.31
RFTN1-208ENST00000470458 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
RFTN1-208ENST00000470458 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
RFTN1-208ENST00000470458 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
RFTN1-208ENST00000470458 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
RFTN1-208ENST00000470458 BRI3BPQ8WY22 251 aa13.09□□□□□ -0.31
RFTN1-208ENST00000470458 RIOK1Q9BRS2 568 aaKnown RBP13.09□□□□□ -0.31
RFTN1-208ENST00000470458 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
RFTN1-208ENST00000470458 IGF2BP3O00425 579 aaKnown RBP eCLIP13.08□□□□□ -0.32
RFTN1-208ENST00000470458 RNF113AO15541 343 aaKnown RBP13.08□□□□□ -0.32
RFTN1-208ENST00000470458 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
RFTN1-208ENST00000470458 TLR2O60603 784 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 GJA5P36382 358 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 CRHR2Q13324 411 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 ADGRA1Q86SQ6 560 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 WDR18Q9BV38 432 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 NACAP1Q9BZK3 213 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 PALD1Q9ULE6 856 aa13.08□□□□□ -0.32
RFTN1-208ENST00000470458 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
RFTN1-208ENST00000470458 A0A0G2JLL6 359 aaPredicted RBP13.07□□□□□ -0.32
RFTN1-208ENST00000470458 TCRBV5S4A2TA0A5A2 114 aa13.07□□□□□ -0.32
RFTN1-208ENST00000470458 OSBPP22059 807 aa13.07□□□□□ -0.32
RFTN1-208ENST00000470458 USP14P54578 494 aa13.07□□□□□ -0.32
RFTN1-208ENST00000470458 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
RFTN1-208ENST00000470458 PRRT2Q7Z6L0 340 aaPredicted RBP13.07□□□□□ -0.32
RFTN1-208ENST00000470458 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
RFTN1-208ENST00000470458 APPBP2Q92624 585 aa13.07□□□□□ -0.32
RFTN1-208ENST00000470458 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
RFTN1-208ENST00000470458 CCDC17Q96LX7 622 aa13.07□□□□□ -0.32
RFTN1-208ENST00000470458 PTPN18Q99952 460 aa13.07□□□□□ -0.32
RFTN1-208ENST00000470458 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 PDHXO00330 501 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
RFTN1-208ENST00000470458 GCLCP48506 637 aaPredicted RBP13.06□□□□□ -0.32
RFTN1-208ENST00000470458 CERKLQ49MI3 558 aaPredicted RBP13.06□□□□□ -0.32
RFTN1-208ENST00000470458 TATDN1Q6P1N9 297 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 FBXO46Q6PJ61 603 aaPredicted RBP13.06□□□□□ -0.32
RFTN1-208ENST00000470458 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 ABHD8Q96I13 439 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 MCOLN1Q9GZU1 580 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 SH2D4AQ9H788 454 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
RFTN1-208ENST00000470458 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 ATAD5Q96QE3 1844 aa13.06□□□□□ -0.32
RFTN1-208ENST00000470458 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
RFTN1-208ENST00000470458 MBD4O95243 580 aa13.05□□□□□ -0.32
RFTN1-208ENST00000470458 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
RFTN1-208ENST00000470458 BACE1P56817 501 aa13.05□□□□□ -0.32
RFTN1-208ENST00000470458 SPP2Q13103 211 aa13.05□□□□□ -0.32
RFTN1-208ENST00000470458 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms