RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 CTGFP29279 349 aa38.3■■■■□ 3.72
HMG20B-209ENST00000470356 PSMC4P43686 418 aa38.3■■■■□ 3.72
HMG20B-209ENST00000470356 GADL1Q6ZQY3 521 aa38.3■■■■□ 3.72
HMG20B-209ENST00000470356 DHX36Q9H2U1 1008 aaKnown RBP38.3■■■■□ 3.72
HMG20B-209ENST00000470356 PI4KBQ9UBF8 816 aa38.3■■■■□ 3.72
HMG20B-209ENST00000470356 HERC5Q9UII4 1024 aaKnown RBP38.3■■■■□ 3.72
HMG20B-209ENST00000470356 TRIM75PA6NK02 468 aa38.29■■■■□ 3.72
HMG20B-209ENST00000470356 BCRP11274 1271 aa38.29■■■■□ 3.72
HMG20B-209ENST00000470356 TRIM47Q96LD4 638 aa38.29■■■■□ 3.72
HMG20B-209ENST00000470356 FRMD4AQ9P2Q2 1039 aaPredicted RBP38.29■■■■□ 3.72
HMG20B-209ENST00000470356 HSP90AB4PQ58FF6 505 aa38.28■■■■□ 3.72
HMG20B-209ENST00000470356 TMEM106CQ9BVX2 250 aa38.28■■■■□ 3.72
HMG20B-209ENST00000470356 FOCADQ5VW36 1801 aa38.27■■■■□ 3.72
HMG20B-209ENST00000470356 CCDC84Q86UT8 332 aaPredicted RBP38.27■■■■□ 3.72
HMG20B-209ENST00000470356 TGFBRAP1Q8WUH2 860 aa38.27■■■■□ 3.72
HMG20B-209ENST00000470356 SRRDQ9UH36 339 aa38.27■■■■□ 3.72
HMG20B-209ENST00000470356 ATAD5Q96QE3 1844 aa38.26■■■■□ 3.72
HMG20B-209ENST00000470356 HOXD10P28358 340 aa38.26■■■■□ 3.72
HMG20B-209ENST00000470356 CAP2P40123 477 aa38.26■■■■□ 3.72
HMG20B-209ENST00000470356 PRPF38BQ5VTL8 546 aaKnown RBP38.26■■■■□ 3.72
HMG20B-209ENST00000470356 ECM2O94769 699 aaPredicted RBP38.25■■■■□ 3.71
HMG20B-209ENST00000470356 FMNL1O95466 1100 aaPredicted RBP38.25■■■■□ 3.71
HMG20B-209ENST00000470356 AACSQ86V21 672 aa38.25■■■■□ 3.71
HMG20B-209ENST00000470356 TBC1D2Q9BYX2 928 aa38.25■■■■□ 3.71
HMG20B-209ENST00000470356 SIPA1L1O43166 1804 aa38.24■■■■□ 3.71
HMG20B-209ENST00000470356 EN2P19622 333 aaPredicted RBP38.24■■■■□ 3.71
HMG20B-209ENST00000470356 RRP1BQ14684 758 aaKnown RBP38.24■■■■□ 3.71
HMG20B-209ENST00000470356 MAPKAPK5Q8IW41 473 aa38.24■■■■□ 3.71
HMG20B-209ENST00000470356 DDX19BQ9UMR2 479 aa38.24■■■■□ 3.71
HMG20B-209ENST00000470356 AGTPBP1Q9UPW5 1226 aa38.24■■■■□ 3.71
HMG20B-209ENST00000470356 MGAMO43451 1857 aa38.24■■■■□ 3.71
HMG20B-209ENST00000470356 FLT1P17948 1338 aa38.23■■■■□ 3.71
HMG20B-209ENST00000470356 IDH1O75874 414 aaKnown RBP38.23■■■■□ 3.71
HMG20B-209ENST00000470356 OSBPP22059 807 aa38.23■■■■□ 3.71
HMG20B-209ENST00000470356 CYP7A1P22680 504 aa38.23■■■■□ 3.71
HMG20B-209ENST00000470356 RPAP2Q8IXW5 612 aaPredicted RBP38.23■■■■□ 3.71
HMG20B-209ENST00000470356 ZNF280CQ8ND82 737 aa38.23■■■■□ 3.71
HMG20B-209ENST00000470356 SH3TC2Q8TF17 1288 aa38.23■■■■□ 3.71
HMG20B-209ENST00000470356 SPP2Q13103 211 aa38.22■■■■□ 3.71
HMG20B-209ENST00000470356 FOXP4Q8IVH2 680 aaPredicted RBP38.22■■■■□ 3.71
HMG20B-209ENST00000470356 RHPN1Q8TCX5 695 aa38.22■■■■□ 3.71
HMG20B-209ENST00000470356 ZBTB40Q9NUA8 1239 aa38.22■■■■□ 3.71
HMG20B-209ENST00000470356 COG6Q9Y2V7 657 aa38.22■■■■□ 3.71
HMG20B-209ENST00000470356 METTL16Q86W50 562 aaKnown RBP38.21■■■■□ 3.71
HMG20B-209ENST00000470356 PROCA1Q8NCQ7 364 aaPredicted RBP38.21■■■■□ 3.71
HMG20B-209ENST00000470356 MKI67P46013 3256 aaKnown RBP38.21■■■■□ 3.71
HMG20B-209ENST00000470356 BRCA2P51587 3418 aa38.2■■■■□ 3.71
HMG20B-209ENST00000470356 USP17L5A8MUK1 530 aa38.2■■■■□ 3.71
HMG20B-209ENST00000470356 FCGRTP55899 365 aa38.2■■■■□ 3.71
HMG20B-209ENST00000470356 TMED8Q6PL24 325 aaPredicted RBP38.2■■■■□ 3.71
HMG20B-209ENST00000470356 DYNLL1P63167 89 aaKnown RBP38.19■■■■□ 3.7
HMG20B-209ENST00000470356 SLC4A8Q2Y0W8 1093 aa38.19■■■■□ 3.7
HMG20B-209ENST00000470356 CERS3Q8IU89 383 aa38.19■■■■□ 3.7
HMG20B-209ENST00000470356 IL1RAPL2Q9NP60 686 aa38.19■■■■□ 3.7
HMG20B-209ENST00000470356 RCAN3Q9UKA8 241 aa38.19■■■■□ 3.7
HMG20B-209ENST00000470356 PALD1Q9ULE6 856 aa38.19■■■■□ 3.7
HMG20B-209ENST00000470356 NDUFB9Q9Y6M9 179 aa38.19■■■■□ 3.7
HMG20B-209ENST00000470356 HMMRO75330 724 aa38.18■■■■□ 3.7
HMG20B-209ENST00000470356 TREML2Q5T2D2 321 aa38.18■■■■□ 3.7
HMG20B-209ENST00000470356 SMCR8Q8TEV9 937 aaPredicted RBP38.18■■■■□ 3.7
HMG20B-209ENST00000470356 ANTXR1Q9H6X2 564 aa38.18■■■■□ 3.7
HMG20B-209ENST00000470356 MYPNQ86TC9 1320 aa38.17■■■■□ 3.7
HMG20B-209ENST00000470356 MAP3K12Q12852 859 aa38.17■■■■□ 3.7
HMG20B-209ENST00000470356 MAGEB6Q8N7X4 407 aa38.17■■■■□ 3.7
HMG20B-209ENST00000470356 RAET1EQ8TD07 263 aa38.17■■■■□ 3.7
HMG20B-209ENST00000470356 SIRT2Q8IXJ6 389 aa38.16■■■■□ 3.7
HMG20B-209ENST00000470356 CHMP4BQ9H444 224 aaKnown RBP38.16■■■■□ 3.7
HMG20B-209ENST00000470356 DNAJC18Q9H819 358 aa38.16■■■■□ 3.7
HMG20B-209ENST00000470356 AS3MTQ9HBK9 375 aa38.16■■■■□ 3.7
HMG20B-209ENST00000470356 PNMA3Q9UL41 463 aa38.16■■■■□ 3.7
HMG20B-209ENST00000470356 LOC285556D6RIA3 1793 aa38.16■■■■□ 3.7
HMG20B-209ENST00000470356 MYH1P12882 1939 aa38.15■■■■□ 3.7
HMG20B-209ENST00000470356 MYCP01106 439 aaPredicted RBP38.15■■■■□ 3.7
HMG20B-209ENST00000470356 ASNSP08243 561 aa38.15■■■■□ 3.7
HMG20B-209ENST00000470356 CLASRPQ8N2M8 674 aaKnown RBP38.15■■■■□ 3.7
HMG20B-209ENST00000470356 CRACR2BQ8N4Y2 399 aaPredicted RBP38.15■■■■□ 3.7
HMG20B-209ENST00000470356 KIF1BPQ96EK5 621 aa38.15■■■■□ 3.7
HMG20B-209ENST00000470356 GRK4P32298 578 aa38.14■■■■□ 3.7
HMG20B-209ENST00000470356 HMGCS2P54868 508 aa38.14■■■■□ 3.7
HMG20B-209ENST00000470356 SH3D19Q5HYK7 790 aa38.14■■■■□ 3.7
HMG20B-209ENST00000470356 MIGA1Q8NAN2 632 aa38.14■■■■□ 3.7
HMG20B-209ENST00000470356 WDR18Q9BV38 432 aa38.14■■■■□ 3.7
HMG20B-209ENST00000470356 TRIM34Q9BYJ4 488 aa38.14■■■■□ 3.7
HMG20B-209ENST00000470356 SAP30BPQ9UHR5 308 aaKnown RBP38.14■■■■□ 3.7
HMG20B-209ENST00000470356 DOCK3Q8IZD9 2030 aa38.13■■■■□ 3.69
HMG20B-209ENST00000470356 GINM1Q9NU53 330 aa38.13■■■■□ 3.69
HMG20B-209ENST00000470356 HLA-DOAP06340 250 aa38.12■■■■□ 3.69
HMG20B-209ENST00000470356 PRKCZQ05513 592 aa38.12■■■■□ 3.69
HMG20B-209ENST00000470356 APBB1O00213 710 aa38.11■■■■□ 3.69
HMG20B-209ENST00000470356 JAG1P78504 1218 aa38.11■■■■□ 3.69
HMG20B-209ENST00000470356 PABPC4Q13310 644 aaKnown RBP eCLIP38.11■■■■□ 3.693e-11■□□□□ 9.8
HMG20B-209ENST00000470356 RAB11FIP3O75154 756 aa38.1■■■■□ 3.69
HMG20B-209ENST00000470356 SLC34A2O95436 690 aa38.1■■■■□ 3.69
HMG20B-209ENST00000470356 TTF1Q15361 905 aaPredicted RBP38.1■■■■□ 3.69
HMG20B-209ENST00000470356 ANKRD13CQ8N6S4 541 aa38.1■■■■□ 3.69
HMG20B-209ENST00000470356 USP5P45974 858 aa38.09■■■■□ 3.69
HMG20B-209ENST00000470356 GABRQQ9UN88 632 aa38.09■■■■□ 3.69
HMG20B-209ENST00000470356 IFIT2P09913 472 aaKnown RBP38.08■■■■□ 3.69
HMG20B-209ENST00000470356 BACE1P56817 501 aa38.08■■■■□ 3.69
HMG20B-209ENST00000470356 MTFR1Q15390 333 aa38.08■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms