RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 DCAF15Q66K64 600 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 DYNLL2Q96FJ2 89 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 ZNF341Q9BYN7 854 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 SERPINB13Q9UIV8 391 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 ZNF112Q9UJU3 913 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 PHF20L1A8MW92 1017 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 APLP1P51693 650 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 C1QTNF8P60827 252 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 FKBP1BP68106 108 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 PPARAQ07869 468 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 TTLL12Q14166 644 aaPredicted RBP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 AMOTL1Q8IY63 956 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 CRACR2BQ8N4Y2 399 aaPredicted RBP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 C2orf69Q8N8R5 385 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 SLC44A5Q8NCS7 719 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 MAP4K1Q92918 833 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 ANO2Q9NQ90 1003 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 HERC5Q9UII4 1024 aaKnown RBP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 ANGEL1Q9UNK9 670 aaKnown RBP12.59□□□□□ -0.39
SMC1A-206ENST00000470241 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
SMC1A-206ENST00000470241 ROBO3Q96MS0 1386 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 TMEM88BA6NKF7 163 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 SHMT1P34896 483 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 LDLRAD1Q5T700 205 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 KIAA1211Q6ZU35 1233 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 ARMC9Q7Z3E5 817 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 ANAPC4Q9UJX5 808 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
SMC1A-206ENST00000470241 INPP5BP32019 993 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
SMC1A-206ENST00000470241 CDK8P49336 464 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 HAND2P61296 217 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 TATDN1Q6P1N9 297 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
SMC1A-206ENST00000470241 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 SAPCD2Q86UD0 394 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 STK11IPQ8N1F8 1099 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 CTNNA3Q9UI47 895 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
SMC1A-206ENST00000470241 TACC3Q9Y6A5 838 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 TLL2Q9Y6L7 1015 aa12.57□□□□□ -0.4
SMC1A-206ENST00000470241 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
SMC1A-206ENST00000470241 PAPPA2Q9BXP8 1791 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 HUNKP57058 714 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 JAG1P78504 1218 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 CTDSPL2Q05D32 466 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 VGLL4Q14135 290 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 TBC1D10CQ8IV04 446 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
SMC1A-206ENST00000470241 CLMNQ96JQ2 1002 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 INCENPQ9NQS7 918 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
SMC1A-206ENST00000470241 UNCXA6NJT0 531 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 ZNF213O14771 459 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
SMC1A-206ENST00000470241 CYP21A2P08686 494 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 FGRP09769 529 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 CAP2P40123 477 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 NECTIN1Q15223 517 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
SMC1A-206ENST00000470241 SHROOM1Q2M3G4 852 aaPredicted RBP12.55□□□□□ -0.4
SMC1A-206ENST00000470241 NOL9Q5SY16 702 aaKnown RBP12.55□□□□□ -0.4
SMC1A-206ENST00000470241 ANKRD13AQ8IZ07 590 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 ABT1Q9ULW3 272 aaKnown RBP12.55□□□□□ -0.4
SMC1A-206ENST00000470241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMC1A-206ENST00000470241 SNCAIPQ9Y6H5 919 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
SMC1A-206ENST00000470241 MYH1P12882 1939 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 PRDM1O75626 825 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 REC8O95072 547 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 GDF11O95390 407 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 SEC24BO95487 1268 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
SMC1A-206ENST00000470241 AKR1B1P15121 316 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 HSPA6P17066 643 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 RASA1P20936 1047 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 HTRA3P83110 453 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
SMC1A-206ENST00000470241 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 SCYL3Q8IZE3 742 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 STAG1Q8WVM7 1258 aa12.54□□□□□ -0.4
SMC1A-206ENST00000470241 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.54□□□□□ -0.4
SMC1A-206ENST00000470241 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
SMC1A-206ENST00000470241 RASSF10A6NK89 507 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 SLC27A2O14975 620 aa12.53□□□□□ -0.4
SMC1A-206ENST00000470241 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms