RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 STXBP5LQ9Y2K9 1186 aa11.38□□□□□ -0.59
CCDC171-204ENST00000470191 SLC45A1Q9Y2W3 748 aa11.38□□□□□ -0.59
CCDC171-204ENST00000470191 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 FRMPD3Q5JV73 1810 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 PEX10O60683 326 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
CCDC171-204ENST00000470191 CYP2B6P20813 491 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 ADORA1P30542 326 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 BTDP43251 543 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 RFX5P48382 616 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-204ENST00000470191 HMGCS2P54868 508 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 MDM2Q00987 491 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-204ENST00000470191 SPP2Q13103 211 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 ATG9AQ7Z3C6 839 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 COL25A1Q9BXS0 654 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-204ENST00000470191 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC171-204ENST00000470191 CEP126Q9P2H0 1117 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 PNMA3Q9UL41 463 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 DENND2AQ9ULE3 1009 aa11.37□□□□□ -0.59
CCDC171-204ENST00000470191 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
CCDC171-204ENST00000470191 TRIB2Q92519 343 aa11.36□□□□□ -0.59
CCDC171-204ENST00000470191 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
CCDC171-204ENST00000470191 CAPN2P17655 700 aa11.35□□□□□ -0.59
CCDC171-204ENST00000470191 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
CCDC171-204ENST00000470191 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
CCDC171-204ENST00000470191 ASCC2Q9H1I8 757 aaPredicted RBP11.35□□□□□ -0.59
CCDC171-204ENST00000470191 GJD2Q9UKL4 321 aa11.35□□□□□ -0.59
CCDC171-204ENST00000470191 PA2G4Q9UQ80 394 aaKnown RBP11.35□□□□□ -0.59
CCDC171-204ENST00000470191 PFASO15067 1338 aa11.35□□□□□ -0.59
CCDC171-204ENST00000470191 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
CCDC171-204ENST00000470191 RFX7Q2KHR2 1363 aa11.34□□□□□ -0.59
CCDC171-204ENST00000470191 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
CCDC171-204ENST00000470191 CCDC102BQ68D86 513 aa11.34□□□□□ -0.59
CCDC171-204ENST00000470191 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC171-204ENST00000470191 FAM9BQ8IZU0 186 aa11.34□□□□□ -0.59
CCDC171-204ENST00000470191 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
CCDC171-204ENST00000470191 ZNF280CQ8ND82 737 aa11.34□□□□□ -0.59
CCDC171-204ENST00000470191 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
CCDC171-204ENST00000470191 MROH7-TTC4A0A0A0MT08 1334 aa11.34□□□□□ -0.59
CCDC171-204ENST00000470191 GAKO14976 1311 aa11.34□□□□□ -0.59
CCDC171-204ENST00000470191 A0A0C4DFX4 3053 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 SIPA1L1O43166 1804 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 TIMM10P62072 90 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
CCDC171-204ENST00000470191 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC171-204ENST00000470191 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 RRP1BQ14684 758 aaKnown RBP11.33□□□□□ -0.6
CCDC171-204ENST00000470191 LRRC26Q2I0M4 334 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
CCDC171-204ENST00000470191 OGDHLQ9ULD0 1010 aa11.33□□□□□ -0.6
CCDC171-204ENST00000470191 MAST2Q6P0Q8 1798 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 SEMA3EO15041 775 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-204ENST00000470191 MECOMQ03112 1051 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-204ENST00000470191 CCL14Q16627 93 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-204ENST00000470191 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
CCDC171-204ENST00000470191 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-204ENST00000470191 PAGR1Q9BTK6 254 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 OSBPL5Q9H0X9 879 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-204ENST00000470191 CWC22Q9HCG8 908 aaKnown RBP11.32□□□□□ -0.6
CCDC171-204ENST00000470191 LAMA3Q16787 3333 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 PTPRCP08575 1304 aa11.32□□□□□ -0.6
CCDC171-204ENST00000470191 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-204ENST00000470191 ZKSCAN1P17029 563 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-204ENST00000470191 CAP2P40123 477 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 RHBDL3P58872 404 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 MTMR2Q13614 643 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 PDE3AQ14432 1141 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 SSH1Q8WYL5 1049 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
CCDC171-204ENST00000470191 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
CCDC171-204ENST00000470191 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
CCDC171-204ENST00000470191 TBC1D12O60347 775 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 CIAO1O76071 339 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 IL15P40933 162 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-204ENST00000470191 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-204ENST00000470191 SHROOM1Q2M3G4 852 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-204ENST00000470191 PI16Q6UXB8 463 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 TBC1D9Q6ZT07 1266 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 ZNF384Q8TF68 577 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 LBHD1Q9BQE6 289 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-204ENST00000470191 SENP6Q9GZR1 1112 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-204ENST00000470191 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
CCDC171-204ENST00000470191 MORF4L1Q9UBU8 362 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms