RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
LINC00173-201ENST00000470091 SPATA5Q8NB90 893 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 RAET1EQ8TD07 263 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 ZNF384Q8TF68 577 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 RAI14Q9P0K7 980 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
LINC00173-201ENST00000470091 SRRDQ9UH36 339 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 ZSWIM8A7E2V4 1837 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 GPR75-ASB3A0A0A6YYF3 556 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 GNRH1P01148 92 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 OSBPP22059 807 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 HOXD10P28358 340 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 PRMT2P55345 433 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 MTFR1Q15390 333 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 C8orf34Q49A92 452 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
LINC00173-201ENST00000470091 PARK7Q99497 189 aaKnown RBP16.5■□□□□ 0.23
LINC00173-201ENST00000470091 BIN2Q9UBW5 565 aaPredicted RBP16.5■□□□□ 0.23
LINC00173-201ENST00000470091 AFG3L2Q9Y4W6 797 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
LINC00173-201ENST00000470091 PDS5AQ29RF7 1337 aaKnown RBP16.49■□□□□ 0.23
LINC00173-201ENST00000470091 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 ZBTB22O15209 634 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 CTNND1O60716 968 aaKnown RBP16.49■□□□□ 0.23
LINC00173-201ENST00000470091 LDHCP07864 332 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 MX1P20591 662 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 RHBDL3P58872 404 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 MAP3K10Q02779 954 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 TSHZ3Q63HK5 1081 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 BACH2Q9BYV9 841 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
LINC00173-201ENST00000470091 ADGRA2Q96PE1 1338 aa16.48■□□□□ 0.23
LINC00173-201ENST00000470091 A0A0G2JLL6 359 aaPredicted RBP16.48■□□□□ 0.23
LINC00173-201ENST00000470091 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
LINC00173-201ENST00000470091 GRK4P32298 578 aa16.48■□□□□ 0.23
LINC00173-201ENST00000470091 PDE1AP54750 535 aa16.48■□□□□ 0.23
LINC00173-201ENST00000470091 GSTO1P78417 241 aa16.48■□□□□ 0.23
LINC00173-201ENST00000470091 PRRT2Q7Z6L0 340 aaPredicted RBP16.48■□□□□ 0.23
LINC00173-201ENST00000470091 CLASRPQ8N2M8 674 aaKnown RBP16.48■□□□□ 0.23
LINC00173-201ENST00000470091 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
LINC00173-201ENST00000470091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00173-201ENST00000470091 MYPNQ86TC9 1320 aa16.47■□□□□ 0.23
LINC00173-201ENST00000470091 BCRP11274 1271 aa16.47■□□□□ 0.23
LINC00173-201ENST00000470091 MCAMP43121 646 aa16.47■□□□□ 0.23
LINC00173-201ENST00000470091 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
LINC00173-201ENST00000470091 AACSQ86V21 672 aa16.47■□□□□ 0.23
LINC00173-201ENST00000470091 UQCRFS1P1P0C7P4 283 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
LINC00173-201ENST00000470091 FCGRTP55899 365 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 PRKCZQ05513 592 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.23
LINC00173-201ENST00000470091 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 OSBPL3Q9H4L5 887 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 GABRQQ9UN88 632 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 RFX7Q2KHR2 1363 aa16.46■□□□□ 0.23
LINC00173-201ENST00000470091 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
LINC00173-201ENST00000470091 SPP2Q13103 211 aa16.45■□□□□ 0.22
LINC00173-201ENST00000470091 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
LINC00173-201ENST00000470091 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
LINC00173-201ENST00000470091 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
LINC00173-201ENST00000470091 EAF2Q96CJ1 260 aaPredicted RBP16.45■□□□□ 0.22
LINC00173-201ENST00000470091 TLR7Q9NYK1 1049 aaKnown RBP16.45■□□□□ 0.22
LINC00173-201ENST00000470091 TBC1D12O60347 775 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 CCL5P13501 91 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 TNNI3KQ59H18 835 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
LINC00173-201ENST00000470091 DBNDD2Q9BQY9 259 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
LINC00173-201ENST00000470091 CCDC8Q9H0W5 538 aaPredicted RBP16.44■□□□□ 0.22
LINC00173-201ENST00000470091 RNF208Q9H0X6 261 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
LINC00173-201ENST00000470091 PCDH10Q9P2E7 1040 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 FPGT-TNNI3KV9GXZ4 949 aa16.44■□□□□ 0.22
LINC00173-201ENST00000470091 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
LINC00173-201ENST00000470091 RRP1BQ14684 758 aaKnown RBP16.43■□□□□ 0.22
LINC00173-201ENST00000470091 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
LINC00173-201ENST00000470091 ANKRD13CQ8N6S4 541 aa16.43■□□□□ 0.22
LINC00173-201ENST00000470091 DPF3Q92784 378 aa16.43■□□□□ 0.22
LINC00173-201ENST00000470091 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00173-201ENST00000470091 RBBP6Q7Z6E9 1792 aaKnown RBP16.42■□□□□ 0.22
LINC00173-201ENST00000470091 H0YGN5 161 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
LINC00173-201ENST00000470091 ADCY3O60266 1144 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
LINC00173-201ENST00000470091 ELNP15502 786 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 FLT3LGP49771 235 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 UBXN2AP68543 259 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 PI4K2BQ8TCG2 481 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 SHISA4Q96DD7 197 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 GPATCH3Q96I76 525 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 AGTPBP1Q9UPW5 1226 aa16.42■□□□□ 0.22
LINC00173-201ENST00000470091 DOCK2Q92608 1830 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 BAG3O95817 575 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 CAP2P40123 477 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms