RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 NAV1Q8NEY1 1877 aa17.12■□□□□ 0.33
COMMD3-208ENST00000470045 CXCL11O14625 94 aa17.12■□□□□ 0.33
COMMD3-208ENST00000470045 PTPRAP18433 802 aa17.12■□□□□ 0.33
COMMD3-208ENST00000470045 MAGEB6Q8N7X4 407 aa17.12■□□□□ 0.33
COMMD3-208ENST00000470045 TGFBRAP1Q8WUH2 860 aa17.12■□□□□ 0.33
COMMD3-208ENST00000470045 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
COMMD3-208ENST00000470045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.12■□□□□ 0.33
COMMD3-208ENST00000470045 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
COMMD3-208ENST00000470045 FAM196BA6NMK8 535 aa17.11■□□□□ 0.33
COMMD3-208ENST00000470045 ATP5JP18859 108 aa17.11■□□□□ 0.33
COMMD3-208ENST00000470045 DYNLL1P63167 89 aaKnown RBP17.11■□□□□ 0.33
COMMD3-208ENST00000470045 ANKRD23Q86SG2 305 aa17.11■□□□□ 0.33
COMMD3-208ENST00000470045 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
COMMD3-208ENST00000470045 MAPKAPK5Q8IW41 473 aa17.11■□□□□ 0.33
COMMD3-208ENST00000470045 DCTPP1Q9H773 170 aa17.11■□□□□ 0.33
COMMD3-208ENST00000470045 ZFYVE28Q9HCC9 887 aa17.11■□□□□ 0.33
COMMD3-208ENST00000470045 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
COMMD3-208ENST00000470045 ZSWIM8A7E2V4 1837 aa17.1■□□□□ 0.33
COMMD3-208ENST00000470045 CCDC85CA6NKD9 419 aa17.1■□□□□ 0.33
COMMD3-208ENST00000470045 SP3Q02447 781 aa17.1■□□□□ 0.33
COMMD3-208ENST00000470045 FBXO46Q6PJ61 603 aaPredicted RBP17.1■□□□□ 0.33
COMMD3-208ENST00000470045 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
COMMD3-208ENST00000470045 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
COMMD3-208ENST00000470045 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
COMMD3-208ENST00000470045 HTTP42858 3142 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 A0A0G2JLL6 359 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-208ENST00000470045 GOLIM4O00461 696 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 TLR2O60603 784 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 RRP1BQ14684 758 aaKnown RBP17.09■□□□□ 0.33
COMMD3-208ENST00000470045 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 PRRT2Q7Z6L0 340 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-208ENST00000470045 MIGA1Q8NAN2 632 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
COMMD3-208ENST00000470045 DNAJC2Q99543 621 aaKnown RBP17.09■□□□□ 0.33
COMMD3-208ENST00000470045 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
COMMD3-208ENST00000470045 DNAJC18Q9H819 358 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 PCDHB15Q9Y5E8 787 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 ZHX2Q9Y6X8 837 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 ADGRA2Q96PE1 1338 aa17.09■□□□□ 0.33
COMMD3-208ENST00000470045 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.32
COMMD3-208ENST00000470045 PDE6AP16499 860 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 CAP2P40123 477 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 CAP1Q01518 475 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 CD99L2Q8TCZ2 262 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.32
COMMD3-208ENST00000470045 HAUS7Q99871 368 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 PAG1Q9NWQ8 432 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.08■□□□□ 0.32
COMMD3-208ENST00000470045 PALD1Q9ULE6 856 aa17.08■□□□□ 0.32
COMMD3-208ENST00000470045 PDHXO00330 501 aa17.07■□□□□ 0.32
COMMD3-208ENST00000470045 RGS19P49795 217 aa17.07■□□□□ 0.32
COMMD3-208ENST00000470045 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
COMMD3-208ENST00000470045 FOXP4Q8IVH2 680 aaPredicted RBP17.07■□□□□ 0.32
COMMD3-208ENST00000470045 BOLA2Q9H3K6 86 aa17.07■□□□□ 0.32
COMMD3-208ENST00000470045 TRIM17Q9Y577 477 aa17.07■□□□□ 0.32
COMMD3-208ENST00000470045 ZNF532Q9HCE3 1301 aa17.06■□□□□ 0.32
COMMD3-208ENST00000470045 C17orf99Q6UX52 265 aa17.06■□□□□ 0.32
COMMD3-208ENST00000470045 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
COMMD3-208ENST00000470045 CCDC84Q86UT8 332 aaPredicted RBP17.06■□□□□ 0.32
COMMD3-208ENST00000470045 TBC1D2Q9BYX2 928 aa17.06■□□□□ 0.32
COMMD3-208ENST00000470045 MGAMO43451 1857 aa17.05■□□□□ 0.32
COMMD3-208ENST00000470045 RBBP6Q7Z6E9 1792 aaKnown RBP17.05■□□□□ 0.32
COMMD3-208ENST00000470045 HLA-DOAP06340 250 aa17.05■□□□□ 0.32
COMMD3-208ENST00000470045 ADD2P35612 726 aa17.05■□□□□ 0.32
COMMD3-208ENST00000470045 EHD4Q9H223 541 aa17.05■□□□□ 0.32
COMMD3-208ENST00000470045 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
COMMD3-208ENST00000470045 SLC45A1Q9Y2W3 748 aa17.05■□□□□ 0.32
COMMD3-208ENST00000470045 MAGEB6P1A0A0J9YX57 407 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 TRIM75PA6NK02 468 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 USP5P45974 858 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 PARK7Q99497 189 aaKnown RBP17.04■□□□□ 0.32
COMMD3-208ENST00000470045 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 EFCC1Q9HA90 598 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 PTPN22Q9Y2R2 807 aa17.04■□□□□ 0.32
COMMD3-208ENST00000470045 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
COMMD3-208ENST00000470045 ASNSP08243 561 aa17.03■□□□□ 0.32
COMMD3-208ENST00000470045 JAG1P78504 1218 aa17.03■□□□□ 0.32
COMMD3-208ENST00000470045 LACTBP83111 547 aaPredicted RBP17.03■□□□□ 0.32
COMMD3-208ENST00000470045 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
COMMD3-208ENST00000470045 PROCA1Q8NCQ7 364 aaPredicted RBP17.03■□□□□ 0.32
COMMD3-208ENST00000470045 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
COMMD3-208ENST00000470045 BAZ2AQ9UIF9 1905 aaKnown RBP17.03■□□□□ 0.32
COMMD3-208ENST00000470045 MYH8P13535 1937 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 SPP2Q13103 211 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 ARHGEF6Q15052 776 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 SH3D19Q5HYK7 790 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 TATDN1Q6P1N9 297 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 GADL1Q6ZQY3 521 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 TTC6Q86TZ1 520 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 LCORLQ8N3X6 602 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 WDR18Q9BV38 432 aa17.02■□□□□ 0.32
COMMD3-208ENST00000470045 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.32
COMMD3-208ENST00000470045 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.02■□□□□ 0.32
COMMD3-208ENST00000470045 AGTPBP1Q9UPW5 1226 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms