RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GNRH1P01148 92 aa19.94■□□□□ 0.78
COL9A3-208ENST00000469802 CTGFP29279 349 aa19.94■□□□□ 0.78
COL9A3-208ENST00000469802 FASTKD5Q7L8L6 764 aaKnown RBP19.94■□□□□ 0.78
COL9A3-208ENST00000469802 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.94■□□□□ 0.78
COL9A3-208ENST00000469802 CPA4Q9UI42 421 aa19.94■□□□□ 0.78
COL9A3-208ENST00000469802 HERC5Q9UII4 1024 aaKnown RBP19.94■□□□□ 0.78
COL9A3-208ENST00000469802 RCAN3Q9UKA8 241 aa19.94■□□□□ 0.78
COL9A3-208ENST00000469802 SLC45A1Q9Y2W3 748 aa19.94■□□□□ 0.78
COL9A3-208ENST00000469802 FLT1P17948 1338 aa19.94■□□□□ 0.78
COL9A3-208ENST00000469802 MYH7P12883 1935 aa19.94■□□□□ 0.78
COL9A3-208ENST00000469802 BCRP11274 1271 aa19.93■□□□□ 0.78
COL9A3-208ENST00000469802 RRP1BQ14684 758 aaKnown RBP19.93■□□□□ 0.78
COL9A3-208ENST00000469802 KIF22Q14807 665 aa19.93■□□□□ 0.78
COL9A3-208ENST00000469802 HSP90AB4PQ58FF6 505 aa19.93■□□□□ 0.78
COL9A3-208ENST00000469802 CCDC84Q86UT8 332 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-208ENST00000469802 AACSQ86V21 672 aa19.93■□□□□ 0.78
COL9A3-208ENST00000469802 SIRT2Q8IXJ6 389 aa19.93■□□□□ 0.78
COL9A3-208ENST00000469802 RPAP2Q8IXW5 612 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-208ENST00000469802 ZNF333Q96JL9 665 aa19.93■□□□□ 0.78
COL9A3-208ENST00000469802 COG6Q9Y2V7 657 aa19.93■□□□□ 0.78
COL9A3-208ENST00000469802 POTEFA5A3E0 1075 aa19.92■□□□□ 0.78
COL9A3-208ENST00000469802 CAP2P40123 477 aa19.92■□□□□ 0.78
COL9A3-208ENST00000469802 METTL16Q86W50 562 aaKnown RBP19.92■□□□□ 0.78
COL9A3-208ENST00000469802 RHPN1Q8TCX5 695 aa19.92■□□□□ 0.78
COL9A3-208ENST00000469802 DHX36Q9H2U1 1008 aaKnown RBP19.92■□□□□ 0.78
COL9A3-208ENST00000469802 CYP2C8P10632 490 aa19.91■□□□□ 0.78
COL9A3-208ENST00000469802 PRMT2P55345 433 aa19.91■□□□□ 0.78
COL9A3-208ENST00000469802 TMED8Q6PL24 325 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-208ENST00000469802 TGFBRAP1Q8WUH2 860 aa19.91■□□□□ 0.78
COL9A3-208ENST00000469802 TRIM47Q96LD4 638 aa19.91■□□□□ 0.78
COL9A3-208ENST00000469802 DNAJC18Q9H819 358 aa19.91■□□□□ 0.78
COL9A3-208ENST00000469802 PI4KBQ9UBF8 816 aa19.91■□□□□ 0.78
COL9A3-208ENST00000469802 NDUFB9Q9Y6M9 179 aa19.91■□□□□ 0.78
COL9A3-208ENST00000469802 MKI67P46013 3256 aaKnown RBP19.91■□□□□ 0.78
COL9A3-208ENST00000469802 TRIM75PA6NK02 468 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 IDH1O75874 414 aaKnown RBP19.9■□□□□ 0.78
COL9A3-208ENST00000469802 SLC9C1Q4G0N8 1177 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 GADL1Q6ZQY3 521 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 MAPKAPK5Q8IW41 473 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 TBC1D2Q9BYX2 928 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 ANTXR1Q9H6X2 564 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 IL1RAPL2Q9NP60 686 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 DOCK3Q8IZD9 2030 aa19.9■□□□□ 0.78
COL9A3-208ENST00000469802 HMMRO75330 724 aa19.89■□□□□ 0.77
COL9A3-208ENST00000469802 CYP7A1P22680 504 aa19.89■□□□□ 0.77
COL9A3-208ENST00000469802 PSMC4P43686 418 aa19.89■□□□□ 0.77
COL9A3-208ENST00000469802 CERS3Q8IU89 383 aa19.89■□□□□ 0.77
COL9A3-208ENST00000469802 PROCA1Q8NCQ7 364 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-208ENST00000469802 KIF1BPQ96EK5 621 aa19.89■□□□□ 0.77
COL9A3-208ENST00000469802 AGTPBP1Q9UPW5 1226 aa19.89■□□□□ 0.77
COL9A3-208ENST00000469802 DYNLL1P63167 89 aaKnown RBP19.88■□□□□ 0.77
COL9A3-208ENST00000469802 MAGEB6Q8N7X4 407 aa19.88■□□□□ 0.77
COL9A3-208ENST00000469802 ZNF280CQ8ND82 737 aa19.88■□□□□ 0.77
COL9A3-208ENST00000469802 SRRDQ9UH36 339 aa19.88■□□□□ 0.77
COL9A3-208ENST00000469802 MYH8P13535 1937 aa19.87■□□□□ 0.77
COL9A3-208ENST00000469802 OSBPP22059 807 aa19.87■□□□□ 0.77
COL9A3-208ENST00000469802 TREML2Q5T2D2 321 aa19.87■□□□□ 0.77
COL9A3-208ENST00000469802 NBPF11Q86T75 865 aa19.87■□□□□ 0.77
COL9A3-208ENST00000469802 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL9A3-208ENST00000469802 CHMP4BQ9H444 224 aaKnown RBP19.87■□□□□ 0.77
COL9A3-208ENST00000469802 PALD1Q9ULE6 856 aa19.87■□□□□ 0.77
COL9A3-208ENST00000469802 USP17L5A8MUK1 530 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 JAG1P78504 1218 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 MAP3K12Q12852 859 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 SPP2Q13103 211 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 PDE3AQ14432 1141 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 SH3D19Q5HYK7 790 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 C20orf194Q5TEA3 1177 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 FOXP4Q8IVH2 680 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-208ENST00000469802 CLASRPQ8N2M8 674 aaKnown RBP19.86■□□□□ 0.77
COL9A3-208ENST00000469802 MIGA1Q8NAN2 632 aa19.86■□□□□ 0.77
COL9A3-208ENST00000469802 MYPNQ86TC9 1320 aa19.85■□□□□ 0.77
COL9A3-208ENST00000469802 RAB11FIP3O75154 756 aa19.85■□□□□ 0.77
COL9A3-208ENST00000469802 ASNSP08243 561 aa19.85■□□□□ 0.77
COL9A3-208ENST00000469802 PRPF38BQ5VTL8 546 aaKnown RBP19.85■□□□□ 0.77
COL9A3-208ENST00000469802 SH3TC2Q8TF17 1288 aa19.85■□□□□ 0.77
COL9A3-208ENST00000469802 RIOK1Q9BRS2 568 aaKnown RBP19.85■□□□□ 0.77
COL9A3-208ENST00000469802 WDR18Q9BV38 432 aa19.85■□□□□ 0.77
COL9A3-208ENST00000469802 PLXNB2O15031 1838 aa19.84■□□□□ 0.77
COL9A3-208ENST00000469802 ECM2O94769 699 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-208ENST00000469802 FMNL1O95466 1100 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-208ENST00000469802 EN2P19622 333 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-208ENST00000469802 HMGCS2P54868 508 aa19.84■□□□□ 0.77
COL9A3-208ENST00000469802 FCGRTP55899 365 aa19.84■□□□□ 0.77
COL9A3-208ENST00000469802 TTF1Q15361 905 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-208ENST00000469802 SMCR8Q8TEV9 937 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-208ENST00000469802 AS3MTQ9HBK9 375 aa19.84■□□□□ 0.77
COL9A3-208ENST00000469802 GINM1Q9NU53 330 aa19.84■□□□□ 0.77
COL9A3-208ENST00000469802 SAP30BPQ9UHR5 308 aaKnown RBP19.84■□□□□ 0.77
COL9A3-208ENST00000469802 BAZ2AQ9UIF9 1905 aaKnown RBP19.83■□□□□ 0.77
COL9A3-208ENST00000469802 APBB1O00213 710 aa19.83■□□□□ 0.77
COL9A3-208ENST00000469802 HLA-DOAP06340 250 aa19.83■□□□□ 0.77
COL9A3-208ENST00000469802 HOXD10P28358 340 aa19.83■□□□□ 0.77
COL9A3-208ENST00000469802 PRKCZQ05513 592 aa19.83■□□□□ 0.77
COL9A3-208ENST00000469802 SHROOM1Q2M3G4 852 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-208ENST00000469802 CRACR2BQ8N4Y2 399 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-208ENST00000469802 TMEM106CQ9BVX2 250 aa19.83■□□□□ 0.77
COL9A3-208ENST00000469802 EHD4Q9H223 541 aa19.83■□□□□ 0.77
COL9A3-208ENST00000469802 PNMA3Q9UL41 463 aa19.83■□□□□ 0.77
COL9A3-208ENST00000469802 ZBTB21Q9ULJ3 1066 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms