RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 MRVI1Q9Y6F6 885 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 MYO5AQ9Y4I1 1855 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 RAD17O75943 681 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 LIG1P18858 919 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 TTLL5Q6EMB2 1281 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 TTC6Q86TZ1 520 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 TRMT1Q9NXH9 659 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 NRBP1Q9UHY1 535 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 ATP6V1DQ9Y5K8 247 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 ZNF646O15015 1829 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 GLRX3O76003 335 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 CCDC192P0DO97 292 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 FZD9O00144 591 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 TPM3P06753 285 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 ZAP70P43403 619 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 PTH1RQ03431 593 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 FAM200AQ8TCP9 573 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 TMX1Q9H3N1 280 aa11.59□□□□□ -0.55
SEMA4D-215ENST00000469653 USP17L3A6NCW0 530 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 USP17L4A6NCW7 530 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 GET4Q7L5D6 327 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 USP17L1Q7RTZ2 530 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 CCDC186Q7Z3E2 898 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 DDX11Q96FC9 970 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 HAUS7Q99871 368 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 EIF6P56537 245 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 CXCL9Q07325 125 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 EDC3Q96F86 508 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 MXD3Q9BW11 206 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 FAM205AQ6ZU69 1335 aa11.58□□□□□ -0.56
SEMA4D-215ENST00000469653 PSMD14O00487 310 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 TYRO3Q06418 890 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 ME3Q16798 604 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 STRIP1Q5VSL9 837 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 PPME1Q9Y570 386 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 GOLGA6L6A8MZA4 724 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 GOLIM4O00461 696 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 WDR66Q8TBY9 1149 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 PDS5AQ29RF7 1337 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 PTPN21Q16825 1174 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 MFSD14BQ5SR56 506 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 CIAPIN1Q6FI81 312 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 ZNF662Q6ZS27 426 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 FILIP1Q7Z7B0 1213 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 PAG1Q9NWQ8 432 aa11.57□□□□□ -0.56
SEMA4D-215ENST00000469653 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 DACT2Q5SW24 774 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 CBX8Q9HC52 389 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 ABCF2Q9UG63 623 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 TNIP1Q15025 636 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 MAP3K11Q16584 847 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 VPS53Q5VIR6 699 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 CDC37L1Q7L3B6 337 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 PDRG1Q9NUG6 133 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 GJA3Q9Y6H8 435 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 VIL1P09327 827 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 CNTROBQ8N137 903 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 TBC1D22AQ8WUA7 517 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 VTI1AQ96AJ9 217 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 NUP62CLQ9H1M0 184 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
SEMA4D-215ENST00000469653 GUCY1B3Q02153 619 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 ANO6Q4KMQ2 910 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 RAB11FIP4Q86YS3 637 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 CERS5Q8N5B7 392 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 FEZ1Q99689 392 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 TRIM5Q9C035 493 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 PIH1D3Q9NQM4 214 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 DOCK2Q92608 1830 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 MYH7P12883 1935 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 GRIK5Q16478 980 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 ISM2Q6H9L7 571 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 ZSCAN25Q6NSZ9 544 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 RSBN1LQ6PCB5 846 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 OGFRQ9NZT2 677 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 SALL1Q9NSC2 1324 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 TTF1Q15361 905 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 PLA2G4DQ86XP0 818 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 DACT1Q9NYF0 836 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
SEMA4D-215ENST00000469653 TNNT1P13805 278 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 MMP14P50281 582 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 MICAL1Q8TDZ2 1067 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 SMTNL1A8MU46 457 aa11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 F8W031 263 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-215ENST00000469653 PRDX5P30044 214 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms