RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CPA4Q9UI42 421 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 PNMA3Q9UL41 463 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 CENPFP49454 3210 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 BRCA2P51587 3418 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 FMNL1O95466 1100 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-204ENST00000469504 PABPC4Q13310 644 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL4A3-204ENST00000469504 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 PI16Q6UXB8 463 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 MIER1Q8N108 512 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 DBNDD2Q9BQY9 259 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 ARHGAP39Q9C0H5 1083 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 AGTPBP1Q9UPW5 1226 aa13.43□□□□□ -0.26
COL4A3-204ENST00000469504 CAP2P40123 477 aa13.42□□□□□ -0.26
COL4A3-204ENST00000469504 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
COL4A3-204ENST00000469504 TRIM47Q96LD4 638 aa13.42□□□□□ -0.26
COL4A3-204ENST00000469504 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
COL4A3-204ENST00000469504 AS3MTQ9HBK9 375 aa13.42□□□□□ -0.26
COL4A3-204ENST00000469504 KIAA0100Q14667 2235 aaKnown RBP13.41□□□□□ -0.26
COL4A3-204ENST00000469504 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 CYP2E1P05181 493 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-204ENST00000469504 CYP2C8P10632 490 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 OSBPP22059 807 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 GRK4P32298 578 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 GADL1Q6ZQY3 521 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
COL4A3-204ENST00000469504 FOXP4Q8IVH2 680 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-204ENST00000469504 ZNF280CQ8ND82 737 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 SLAIN1Q8ND83 568 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 SMCR8Q8TEV9 937 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-204ENST00000469504 DOCK1Q14185 1865 aa13.41□□□□□ -0.26
COL4A3-204ENST00000469504 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 TRIM75PA6NK02 468 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 USP17L5A8MUK1 530 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 ASNSP08243 561 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 RLBP1P12271 317 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 EN2P19622 333 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-204ENST00000469504 GCLCP48506 637 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-204ENST00000469504 UBXN2AP68543 259 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 SH3D19Q5HYK7 790 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-204ENST00000469504 C1orf115Q9H7X2 142 aa13.4□□□□□ -0.26
COL4A3-204ENST00000469504 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL4A3-204ENST00000469504 DBNLQ9UJU6 430 aaKnown RBP13.4□□□□□ -0.26
COL4A3-204ENST00000469504 HLA-DOAP06340 250 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 CTGFP29279 349 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 IRF5Q13568 498 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 FAM110CQ1W6H9 321 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 SNRKQ9NRH2 765 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 FLT1P17948 1338 aa13.39□□□□□ -0.27
COL4A3-204ENST00000469504 HMMRO75330 724 aa13.38□□□□□ -0.27
COL4A3-204ENST00000469504 ZAP70P43403 619 aa13.38□□□□□ -0.27
COL4A3-204ENST00000469504 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
COL4A3-204ENST00000469504 SPP2Q13103 211 aa13.38□□□□□ -0.27
COL4A3-204ENST00000469504 RPAP2Q8IXW5 612 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-204ENST00000469504 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
COL4A3-204ENST00000469504 TGFBRAP1Q8WUH2 860 aa13.38□□□□□ -0.27
COL4A3-204ENST00000469504 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-204ENST00000469504 DDX19BQ9UMR2 479 aa13.38□□□□□ -0.27
COL4A3-204ENST00000469504 MKI67P46013 3256 aaKnown RBP13.38□□□□□ -0.27
COL4A3-204ENST00000469504 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
COL4A3-204ENST00000469504 TNPO2O14787 897 aaKnown RBP13.37□□□□□ -0.27
COL4A3-204ENST00000469504 GJB1P08034 283 aa13.37□□□□□ -0.27
COL4A3-204ENST00000469504 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
COL4A3-204ENST00000469504 PRKCZQ05513 592 aa13.37□□□□□ -0.27
COL4A3-204ENST00000469504 TTF1Q15361 905 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-204ENST00000469504 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-204ENST00000469504 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL4A3-204ENST00000469504 COA7Q96BR5 231 aa13.37□□□□□ -0.27
COL4A3-204ENST00000469504 CCDC8Q9H0W5 538 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-204ENST00000469504 IDH1O75874 414 aaKnown RBP13.36□□□□□ -0.27
COL4A3-204ENST00000469504 CYP7A1P22680 504 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 GJA8P48165 433 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 BACE1P56817 501 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 ADGRA1Q86SQ6 560 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 MAPKAPK5Q8IW41 473 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 CLASRPQ8N2M8 674 aaKnown RBP13.36□□□□□ -0.27
COL4A3-204ENST00000469504 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-204ENST00000469504 KIF1BPQ96EK5 621 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 EHD4Q9H223 541 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 PIH1D3Q9NQM4 214 aaKnown RBP13.36□□□□□ -0.27
COL4A3-204ENST00000469504 TLR7Q9NYK1 1049 aaKnown RBP13.36□□□□□ -0.27
COL4A3-204ENST00000469504 TMOD4Q9NZQ9 345 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 TAOK2Q9UL54 1235 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
COL4A3-204ENST00000469504 PTPRFP10586 1907 aa13.35□□□□□ -0.27
COL4A3-204ENST00000469504 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
COL4A3-204ENST00000469504 ADCY3O60266 1144 aa13.35□□□□□ -0.27
COL4A3-204ENST00000469504 SLURP2P0DP57 97 aa13.35□□□□□ -0.27
COL4A3-204ENST00000469504 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-204ENST00000469504 FLT3LGP49771 235 aa13.35□□□□□ -0.27
COL4A3-204ENST00000469504 HMGCS2P54868 508 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms