RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 PROCA1Q8NCQ7 364 aaPredicted RBP13.48□□□□□ -0.25
TRAIP-202ENST00000469027 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAIP-202ENST00000469027 APBA2Q99767 749 aa13.48□□□□□ -0.25
TRAIP-202ENST00000469027 PLA2G12BQ9BX93 195 aa13.48□□□□□ -0.25
TRAIP-202ENST00000469027 PBX4Q9BYU1 374 aa13.48□□□□□ -0.25
TRAIP-202ENST00000469027 ASCC2Q9H1I8 757 aaPredicted RBP13.48□□□□□ -0.25
TRAIP-202ENST00000469027 CNNM1Q9NRU3 951 aa13.48□□□□□ -0.25
TRAIP-202ENST00000469027 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.48□□□□□ -0.25
TRAIP-202ENST00000469027 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
TRAIP-202ENST00000469027 ZDBF2Q9HCK1 2354 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 RLFQ13129 1914 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 PI4KAP2A4QPH2 592 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 NEURL1BA8MQ27 555 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 H7C1W4 665 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
TRAIP-202ENST00000469027 CSF1RP07333 972 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 NFIAQ12857 509 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 PI4KAP1Q8N8J0 262 aa13.47□□□□□ -0.25
TRAIP-202ENST00000469027 FAM84BQ96KN1 310 aaPredicted RBP13.47□□□□□ -0.25
TRAIP-202ENST00000469027 MYBBP1AQ9BQG0 1328 aaKnown RBP13.46□□□□□ -0.25
TRAIP-202ENST00000469027 PHF20L1A8MW92 1017 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 GRXCR1A8MXD5 290 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 PRR33A8MZF0 331 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 ITGB8P26012 769 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 IRX3P78415 501 aaPredicted RBP13.46□□□□□ -0.25
TRAIP-202ENST00000469027 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 KSR2Q6VAB6 950 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 LDHAL6AQ6ZMR3 332 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
TRAIP-202ENST00000469027 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 TACC3Q9Y6A5 838 aa13.46□□□□□ -0.25
TRAIP-202ENST00000469027 DOCK1Q14185 1865 aa13.46□□□□□ -0.26
TRAIP-202ENST00000469027 PEX10O60683 326 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 CLTBP09497 229 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 MAPK4P31152 587 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 HMGCS2P54868 508 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 FOXK2Q01167 660 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 TLE2Q04725 743 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 UBE4AQ14139 1066 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 GPRC5AQ8NFJ5 357 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 FERMT2Q96AC1 680 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 FBXL18Q96ME1 805 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
TRAIP-202ENST00000469027 MORF4L1Q9UBU8 362 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 MSRAQ9UJ68 235 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
TRAIP-202ENST00000469027 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 DOCK2Q92608 1830 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 XIRP2A4UGR9 3374 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 ERC2O15083 957 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
TRAIP-202ENST00000469027 SPP2Q13103 211 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 GCKRQ14397 625 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 CDC42EP5Q6NZY7 148 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 ZNF594Q96JF6 807 aaPredicted RBP13.44□□□□□ -0.26
TRAIP-202ENST00000469027 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
TRAIP-202ENST00000469027 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 PI4K2BG5E9Z4 385 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 ADCYAP1R1P41586 468 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 SNX17Q15036 470 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
TRAIP-202ENST00000469027 ANO1Q5XXA6 986 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 GPR142Q7Z601 462 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 PLEKHH3Q7Z736 793 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 ZFPM1Q8IX07 1006 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 USP6NLQ92738 828 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 SLC28A3Q9HAS3 691 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
TRAIP-202ENST00000469027 UTYO14607 1347 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 RAB30Q15771 203 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 CAVIN4Q5BKX8 364 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 MORN1Q5T089 497 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 HERVK_113Q902F9 699 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAIP-202ENST00000469027 PAGR1Q9BTK6 254 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 NKX2-4Q9H2Z4 354 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 TMEM39AQ9NV64 488 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 USP40Q9NVE5 1235 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
TRAIP-202ENST00000469027 LOC285556D6RIA3 1793 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 ST18O60284 1047 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 PQBP1O60828 265 aaKnown RBP13.41□□□□□ -0.26
TRAIP-202ENST00000469027 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 MAP2K5Q13163 448 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 EDC3Q96F86 508 aaKnown RBP13.41□□□□□ -0.26
TRAIP-202ENST00000469027 PORCNQ9H237 461 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 TXNRD2Q9NNW7 524 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 FLRT1Q9NZU1 646 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 ATRNL1Q5VV63 1379 aa13.41□□□□□ -0.26
TRAIP-202ENST00000469027 CHD9Q3L8U1 2897 aa13.4□□□□□ -0.26
TRAIP-202ENST00000469027 TLL1O43897 1013 aa13.4□□□□□ -0.26
TRAIP-202ENST00000469027 CYP2C19P33261 490 aa13.4□□□□□ -0.26
TRAIP-202ENST00000469027 DIXDC1Q155Q3 683 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms