RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SLC5A6Q9Y289 635 aa8.39□□□□□ -1.07
LSM5-209ENST00000468872 U3KQE9 123 aa8.39□□□□□ -1.07
LSM5-209ENST00000468872 PSMD2Q13200 908 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 AGBL5Q8NDL9 886 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 NETO1Q8TDF5 533 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 KRTAP4-12Q9BQ66 201 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 BCL11AQ9H165 835 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 PICK1Q9NRD5 415 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 PCDHA4Q9UN74 947 aa8.38□□□□□ -1.07
LSM5-209ENST00000468872 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
LSM5-209ENST00000468872 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
LSM5-209ENST00000468872 TSNAXIP1Q2TAA8 658 aa8.37□□□□□ -1.07
LSM5-209ENST00000468872 ZBTB37Q5TC79 503 aa8.37□□□□□ -1.07
LSM5-209ENST00000468872 SV2BQ7L1I2 683 aa8.37□□□□□ -1.07
LSM5-209ENST00000468872 STK11IPQ8N1F8 1099 aa8.37□□□□□ -1.07
LSM5-209ENST00000468872 TOP6BLQ8N6T0 577 aa8.37□□□□□ -1.07
LSM5-209ENST00000468872 FMNL2Q96PY5 1086 aa8.37□□□□□ -1.07
LSM5-209ENST00000468872 BACH2Q9BYV9 841 aa8.37□□□□□ -1.07
LSM5-209ENST00000468872 FANCGO15287 622 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 SORBS3O60504 671 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 TCF3P15923 654 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 ZNF574Q6ZN55 896 aaPredicted RBP8.36□□□□□ -1.07
LSM5-209ENST00000468872 SPRED2Q7Z698 418 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 UBE3DQ7Z6J8 389 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 WFDC3Q8IUB2 231 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 MKNK2Q9HBH9 465 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
LSM5-209ENST00000468872 OXCT1P55809 520 aa8.35□□□□□ -1.07
LSM5-209ENST00000468872 PTPN11Q06124 597 aaPredicted RBP8.35□□□□□ -1.07
LSM5-209ENST00000468872 ELMO3Q96BJ8 720 aa8.35□□□□□ -1.07
LSM5-209ENST00000468872 BNIP3Q12983 259 aa8.34□□□□□ -1.07
LSM5-209ENST00000468872 INPP5AQ14642 412 aa8.34□□□□□ -1.07
LSM5-209ENST00000468872 IFI16Q16666 785 aaKnown RBP8.34□□□□□ -1.07
LSM5-209ENST00000468872 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
LSM5-209ENST00000468872 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
LSM5-209ENST00000468872 VTI1BQ9UEU0 232 aa8.34□□□□□ -1.07
LSM5-209ENST00000468872 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
LSM5-209ENST00000468872 AK5Q9Y6K8 562 aa8.34□□□□□ -1.07
LSM5-209ENST00000468872 CEACAM5P06731 702 aa8.33□□□□□ -1.08
LSM5-209ENST00000468872 LRFN4Q6PJG9 635 aa8.33□□□□□ -1.08
LSM5-209ENST00000468872 CDC37L1Q7L3B6 337 aa8.33□□□□□ -1.08
LSM5-209ENST00000468872 FAM214BQ7L5A3 538 aa8.33□□□□□ -1.08
LSM5-209ENST00000468872 GAL3ST3Q96A11 431 aa8.33□□□□□ -1.08
LSM5-209ENST00000468872 HEXIM2Q96MH2 286 aaKnown RBP8.33□□□□□ -1.08
LSM5-209ENST00000468872 PRDM10Q9NQV6 1147 aa8.33□□□□□ -1.08
LSM5-209ENST00000468872 PRKCQQ04759 706 aa8.32□□□□□ -1.08
LSM5-209ENST00000468872 PLCL1Q15111 1095 aa8.32□□□□□ -1.08
LSM5-209ENST00000468872 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
LSM5-209ENST00000468872 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
LSM5-209ENST00000468872 CYFIP1Q7L576 1253 aa8.32□□□□□ -1.08
LSM5-209ENST00000468872 KCT2Q8NC54 265 aa8.32□□□□□ -1.08
LSM5-209ENST00000468872 PLPPR2Q96GM1 343 aa8.32□□□□□ -1.08
LSM5-209ENST00000468872 VAV3Q9UKW4 847 aa8.32□□□□□ -1.08
LSM5-209ENST00000468872 PLAGL2Q9UPG8 496 aa8.32□□□□□ -1.08
LSM5-209ENST00000468872 PRAMEF27A3QJZ7 478 aa8.31□□□□□ -1.08
LSM5-209ENST00000468872 CTSHP09668 335 aa8.31□□□□□ -1.08
LSM5-209ENST00000468872 CD8BP10966 210 aa8.31□□□□□ -1.08
LSM5-209ENST00000468872 ITIH2P19823 946 aa8.31□□□□□ -1.08
LSM5-209ENST00000468872 TXKP42681 527 aa8.31□□□□□ -1.08
LSM5-209ENST00000468872 HDXQ7Z353 690 aa8.31□□□□□ -1.08
LSM5-209ENST00000468872 GTF2IRD1Q9UHL9 959 aa8.31□□□□□ -1.08
LSM5-209ENST00000468872 ITGB5P18084 799 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 ITGAEP38570 1179 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 RPS26P62854 115 aaKnown RBP8.3□□□□□ -1.08
LSM5-209ENST00000468872 ARMCX6Q7L4S7 300 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 ZNF507Q8TCN5 953 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 HRASLS5Q96KN8 279 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 GOLGA2P5Q9HBQ8 144 aa8.3□□□□□ -1.08
LSM5-209ENST00000468872 TMEM265A0A087WTH1 108 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 IGF2BP3O00425 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
LSM5-209ENST00000468872 SCAMP3O14828 347 aaKnown RBP8.29□□□□□ -1.08
LSM5-209ENST00000468872 CD96P40200 585 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 CDK8P49336 464 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 AOC3Q16853 763 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 ZNF792Q3KQV3 632 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 WIPI1Q5MNZ9 446 aaPredicted RBP8.29□□□□□ -1.08
LSM5-209ENST00000468872 TNKS2Q9H2K2 1166 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 FBRSQ9HAH7 460 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 SNCAIPQ9Y6H5 919 aa8.29□□□□□ -1.08
LSM5-209ENST00000468872 LRIG2O94898 1065 aa8.28□□□□□ -1.08
LSM5-209ENST00000468872 EOMESO95936 686 aa8.28□□□□□ -1.08
LSM5-209ENST00000468872 FUT4P22083 530 aa8.28□□□□□ -1.08
LSM5-209ENST00000468872 HDLBPQ00341 1268 aaKnown RBP8.28□□□□□ -1.08
LSM5-209ENST00000468872 MEI1Q5TIA1 1274 aa8.28□□□□□ -1.08
LSM5-209ENST00000468872 CRELD1Q96HD1 420 aa8.28□□□□□ -1.08
LSM5-209ENST00000468872 PCDHB5Q9Y5E4 795 aa8.28□□□□□ -1.08
LSM5-209ENST00000468872 JUNBP17275 347 aaPredicted RBP8.27□□□□□ -1.09
LSM5-209ENST00000468872 LMNB1P20700 586 aa8.27□□□□□ -1.09
LSM5-209ENST00000468872 SEPT6Q14141 434 aa8.27□□□□□ -1.09
LSM5-209ENST00000468872 SLBPQ14493 270 aaKnown RBP eCLIP8.27□□□□□ -1.09
LSM5-209ENST00000468872 MAP3K11Q16584 847 aa8.27□□□□□ -1.09
LSM5-209ENST00000468872 AGMOQ6ZNB7 445 aa8.27□□□□□ -1.09
LSM5-209ENST00000468872 WNT10AQ9GZT5 417 aa8.27□□□□□ -1.09
LSM5-209ENST00000468872 SNX11Q9Y5W9 270 aa8.27□□□□□ -1.09
LSM5-209ENST00000468872 SLITRK5O94991 958 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms